Methylocystis sp. SC2: BN69_0214
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Entry
BN69_0214 CDS
T02324
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
msc
Methylocystis sp. SC2
Pathway
msc03030
DNA replication
msc03430
Mismatch repair
msc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN69_0214 (dnaE)
03430 Mismatch repair
BN69_0214 (dnaE)
03440 Homologous recombination
BN69_0214 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msc03032
]
BN69_0214 (dnaE)
03400 DNA repair and recombination proteins [BR:
msc03400
]
BN69_0214 (dnaE)
Enzymes [BR:
msc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN69_0214 (dnaE)
DNA replication proteins [BR:
msc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BN69_0214 (dnaE)
DNA repair and recombination proteins [BR:
msc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BN69_0214 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
DUF6635
Motif
Other DBs
NCBI-ProteinID:
CCJ05665
LinkDB
All DBs
Position
256486..259947
Genome browser
AA seq
1153 aa
AA seq
DB search
MPAAEAGFAHLHVHTAYSLREGALSLGKLIDLAVRDLQPALAVTDTNNLFAALEFSEKAV
KAGLQPIAGAQLRVDFSDGRGGAVAARDDGFANIVLLAKTEAGYRNLMRLASRAFLDTEQ
GDEPHLTLEALAADAEELIALTGGPDGALDRPLAQGRPEQARARLATLERLYGDRLYVEV
QRHNLRAERDVEPQLLDLAYRRGLPLVATNEPYFAQPADFEAHDALLCIAEGAVTSVDDR
RRVSPEHYFKTRAQMCALFADLQEATANTLEIARRVSFRPQTRKPIMPRFVQEARDAQSL
DDIEAQELRRQATEGLEQRLAAHGPAPGRTREEYAARLDFELSVIEKMRFPGYFLIVSDF
IKFAKSQGIPVGPGRGSGAGSLVAYALTITDLDPVRFGLFFERFLNPERNSMPDFDIDFC
QTRRGEVIDYVRRRYGADRVAQIITFGSFLARGVLRSVGRVLEMPLGQVDKLAKLVPQNP
AKPVTLAEALASEQKLREAVEEDERVRRLFKIAGSLEGLFSNASTHAAGVVIGDRPLHEV
TPLYRDPKSDMPATQFNMKWVEPAGLIKFDFLGLKTLTVLATASSLARRRDPAFDLAKVP
LDDPATYALLGRGETVGIFQLESAGMRKALVEMHADRFEDIIALVALYRPGPMANIPTYC
AVKLGDEEADYYHPKIEPILKETFGVIIYQEQVMQIAQVLSGYTLGEADMLRRAMGKKIK
SEMDAQRERFVKGAIARDVKADLANFIFDLLAKFADYGFNKSHAAAYALIAYQTAWFKTH
YPAEFLAASMTFDKSQTDKLAEFRDEARRMGIAVEPPSINESGVDFDVAPGAEGRLAIRY
AFSALKGVGEAQAESLVRSRGARQFTSLADVARRLNPREVNKKTLESLAACGAFDEIEPN
RARAFAAIEAMLAAANRHAEDRKAGQNALFGDAEAADLAVPKTPPWPASETLRREYEAAG
FFLSGHPLDAYAGLLPKIRVSRWSEFAASVKRGATAGRLAAVVLDRTERRTKSGSKMGIL
QLSDVSGHYEAILFQEGLIQYRDLLEKGAAVLVTLSAAVEGEDVRARIVAVEPLAAAAAR
AQKGLRVVVGDEEPLDGIRTQLAGRGDGEVSILLKRDAGREEIEIRLPGSYPVTAEVAGA
LRAIPGVLEVEYL
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgccgaagccggctttgcgcatcttcacgtccacaccgcctattccctgcgc
gagggcgcgctttcgctcggcaagctgattgatctcgcggtgcgcgaccttcagcccgcg
ctcgccgtcaccgacaccaataatcttttcgcggccctggagttttccgagaaggccgtc
aaggccggcctccagccgatcgcaggcgcacagctccgggtcgattttagcgacggcagg
ggcggcgcggtcgcggcgcgcgacgacggtttcgccaatatcgtgctgctggccaagacc
gaggccggctaccgcaatttgatgcggctcgcctcccgcgcctttctcgacacggagcag
ggcgacgagccgcatctgacgctcgaagcgctggccgccgacgccgaggagctgatcgcg
ctgaccggcgggcctgacggcgcattggaccgtccgctggcgcagggcaggccggagcag
gcgcgtgcgcgccttgcaacgctcgagcgtctctatggcgaccggctgtatgtcgaggtc
cagcgccacaatttgcgcgccgaacgcgatgtcgagccgcagctgctggaccttgcctat
cgtcgcggcttgccgctcgtggcgaccaacgagccctatttcgcgcagcccgccgatttc
gaagcgcatgacgcgctgctctgcatcgccgagggcgcggtgacgagcgtcgacgatcgc
aggcgggtctcgcccgagcactacttcaagactcgcgcccaaatgtgcgcgcttttcgcc
gatctccaagaggcgaccgccaacacgctggagatcgcccgtcgagtcagcttccggccc
caaacgcgcaagccgatcatgccgcgattcgtccaggaggcgcgcgatgcgcagtctctc
gacgacatcgaggcgcaggagctgcgccggcaagcgacggaggggctggagcagcgcctc
gccgcgcatgggccggcgccgggccgaacgcgggaagaatacgccgcgcgactcgatttc
gaactttccgtcatcgagaagatgcgctttccgggctatttcctcatcgtctccgacttc
atcaaattcgccaaatcccagggaattccggtcggaccgggacgcggctccggcgcgggt
tcgctcgtcgcctatgcgctgaccatcaccgatctggatccggttcgcttcgggctcttc
ttcgagcgcttcctcaaccccgagcgcaattcgatgccggacttcgacatcgacttctgc
cagacgcggcgcggcgaggtgatcgactacgtcagacgccgctatggcgccgaccgggtg
gcgcagatcatcaccttcggctccttcctggcgcgcggcgttttgcgcagcgtcggtcgc
gtgctcgaaatgccgctcggacaggtcgacaagctcgccaagctcgtgccgcagaatccg
gcgaagcccgtcacgctcgccgaggcgctggcgagcgagcagaagctgcgcgaggccgtg
gaggaggacgagcgcgtcaggcggctctttaaaatcgcgggctcgctcgaagggcttttt
tccaacgcctccacccacgccgccggcgtcgtcatcggcgaccggccgctgcatgaggtg
acgccgctttaccgcgatccgaagtccgacatgccggcgacccagttcaatatgaagtgg
gtcgagccggcgggattgatcaaattcgactttctcggtctgaagacgctcaccgtgctc
gcaacggcgagcagtctggcgcgccggcgagatccggcgttcgatctcgccaaagtgccg
ctcgacgatccagcgacctatgcgctgctcggccgcggcgagacggtcgggatattccag
ctggaaagcgccggcatgcgcaaggcgctggtcgaaatgcacgcggatcgctttgaggac
atcattgcgctcgtggcgctgtatcgcccgggaccgatggccaatatccccacctattgc
gcggtgaagctcggcgatgaggaggcggattattaccatcccaagatcgagcccattctg
aaggagaccttcggcgtcatcatctatcaggagcaggtgatgcagatcgcgcaggtgctc
tccggctacacgctgggcgaagccgatatgctccgccgcgccatgggcaaaaaaatcaag
tccgagatggacgcccagcgcgagcgcttcgtcaaaggcgccatcgcgcgcgatgtaaag
gccgacctcgctaattttattttcgacctcttggcgaaattcgccgattatggcttcaac
aagagccatgcggcggcctatgcgctgatcgcttatcagactgcttggttcaagacgcat
tatccggcggaattcctcgccgcctcaatgaccttcgacaagagccagaccgacaagctc
gccgagttccgcgacgaggcgcggcgcatgggcatcgcggtcgagccgccctcgatcaat
gagtcgggcgtcgacttcgacgtcgcgcctggcgccgaaggcaggctggcgatccgctac
gcattttcggccctcaagggcgtcggcgaagcgcaggccgagtctctcgtgcgctcacgc
ggggcgcgccaatttacgagcctcgccgacgtcgcgagacggctgaacccccgcgaagtg
aacaagaagacgctggagagccttgcggcctgcggcgccttcgacgaaatcgagcccaat
cgcgccagggctttcgccgcgatcgaggcgatgctcgccgcggcgaataggcacgccgag
gaccgcaaggccggacaaaacgcgctctttggcgacgccgaggctgcggacctcgcggtt
ccaaagacgccgccctggccagcgtccgagacgctgcgacgtgaatatgaagccgccggt
ttttttctctcgggccatccgctcgacgcttacgccggccttttacccaagatccgcgtg
tcgcgctggagcgaattcgccgcctccgtcaagcgcggcgccaccgccggccggctcgcc
gccgtcgttctggacagaaccgaaaggcgcaccaagtccgggtccaagatggggatcttg
cagctctcggacgtcagcggacactatgaggcgattctcttccaggagggcctgatccaa
tatcgcgatcttttggagaagggcgcggcggtgctcgtgactctatccgcggcggtcgag
ggcgaggacgtccgggcgcgcatcgttgctgtcgaacctttggcagcggcggcggcgcgc
gcgcaaaagggactgcgcgtcgtcgtcggcgacgaggagccgctcgacgggatcaggact
cagctcgccggccgtggcgacggcgaggtgtcgattcttctgaagcgcgacgcgggacgg
gaggaaatcgaaatccgcctacccggaagctacccggtcactgcggaagtcgccggcgcg
ctgcgcgccattccgggcgttctggaggtcgaatatctatag
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