KEGG   Methylocystis sp. SC2: BN69_0731
Entry
BN69_0731         CDS       T02324                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
msc  Methylocystis sp. SC2
Pathway
msc03030  DNA replication
msc03410  Base excision repair
msc03420  Nucleotide excision repair
msc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:msc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BN69_0731
   03410 Base excision repair
    BN69_0731
   03420 Nucleotide excision repair
    BN69_0731
   03440 Homologous recombination
    BN69_0731
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msc03032]
    BN69_0731
   03400 DNA repair and recombination proteins [BR:msc03400]
    BN69_0731
Enzymes [BR:msc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BN69_0731
DNA replication proteins [BR:msc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BN69_0731
DNA repair and recombination proteins [BR:msc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     BN69_0731
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BN69_0731
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 Taq-exonuc
Other DBs
NCBI-ProteinID: CCJ06182
LinkDB
Position
793485..796478
AA seq 997 aa
MTLTHKPVGPGSHVFLVDGSSFVFRAYFQSIRQDAKYNYRSDRLPTGAVRLFCTKLLQFV
REGAAGVMPTHLAIIFDKSEHSFRKDLYPDYKAHRSEPPDDLIPQFPLMRAVVRAFGLTP
IEQDVYEADDLIATYATQAQAKGADVLIVSADKDLMQLVGPGVRMYDPASGTAGTKGARE
ERLIGEAEVVDYFGVTPDKVVDVQALAGDSTDNVPGAKGIGVKTAAQLINEYGDLETLLA
RAPEIKQPKRREALTEPDAVARILLSKKLCELVRDAPVVTRLEDLGLHQPDAAKLIAFLQ
AMEFTTITRRVAEMYGVQAQDIEPDPRFLGAAGWRGRDGEVSEIAAPASEAPNRAEKATS
DALTPANLVAARRAEAKSVKIDRSTYETVVSAERLDDWITEAAGAGLVAINVETTLPDPM
RCELIGVSLATAPGRACYIPLQHRSGDSADLFSGANLVEGQIPLDVALARLKPLFEDAAI
LKIAHNMKHDLLVLSRYGIDVAPIDDAMLMSYALDSGRGDHRLEELARNYCGHDALTFAS
VAGAGRNFLGFARAALTAATEYAAEQADIALRLWRVLKPRLSAERMTTVYETLERPMVAT
LARMERRGVMVERATLSRLSGEFAQDMARLEAEIFELAGESFNLGSPKQLGDILFGKMGL
PGAKKTATGALSTSASVLEDLAVAGNDFSRRILDWRQLSKLKSTYADALPGYINAETGRV
HTSYALAATTTGRLSSSEPNLQNIPVRNEAGRKIRKAFVSAPGHVLISADYSQIELRLLA
HIADIPQLRRAFAENLDIHAMTASEMFNVPIKDMPPETRRRAKAINFGIIYGISAFGLAN
QLSIPREEASAYIKRYFERFPGIRDYMDSTRKTVREKGAVSTIFGRIYHFPGISSANASD
RAFYERAAINAPIQGAAADIIRRAMIRMDDALIRAGLSAQMLLQVHDELVFEAPNEEAEA
TIELARRVMEQAPAPAVHLAVPLKVDARAAANWDEAH
NT seq 2994 nt   +upstreamnt  +downstreamnt
atgaccctcacgcataagcccgtcggccccgggagccacgtcttcctcgtcgacggctcc
tccttcgtctttcgcgcctatttccagtcgatccgacaggatgcgaaatacaactatcgc
tccgaccggctgccgaccggcgccgtgcggctgttctgcacgaagctgttgcagttcgtg
cgcgaaggcgcggccggcgtgatgcccacgcatctcgccatcatcttcgacaagagcgag
cactccttccgaaaagacctttatcccgactacaaggcgcaccgctccgagccgccggac
gatctcattccgcagttcccgctgatgcgcgccgtcgtgcgcgctttcggcctcaccccg
atcgaacaggacgtctacgaggccgacgatctcatcgccacctatgcgacgcaggcgcag
gccaagggcgcggacgtgctaatcgtctcggccgacaaggatctgatgcagctcgtcggt
cccggcgtcagaatgtacgaccccgcctcgggcacggcgggaacgaaaggcgcgcgcgaa
gaacgcctcatcggcgaggccgaggtcgtcgactatttcggcgttacgccggacaaggtc
gtcgacgtgcaggcgctcgcgggcgattccaccgacaatgtgccgggcgcaaaaggcatc
ggcgtcaagaccgccgctcagctcatcaatgaatatggcgatctcgaaacgctgctcgcc
agggcgcccgagatcaagcagccgaagcgccgcgaggccctgaccgagccggatgcggtc
gcgcgcatccttctttcaaagaagctctgcgaactggtgcgcgacgcgcctgtcgtaacc
cggctcgaagacctcggccttcatcagccggacgcggcgaagcttatcgcttttctgcag
gcgatggagttcacgaccatcacccgccgcgtcgccgagatgtatggcgtgcaggcgcag
gacatcgagcccgatccccgattcttgggcgcggccggttggcgcgggcgcgacggcgaa
gtgtccgagatcgcggcgcccgcttccgaagcgccgaaccgcgccgagaaagcgacaagc
gacgcgctcacgcccgcgaacctcgtcgccgcgcgccgcgccgaagcgaagtcggtcaag
atcgaccgctcgacctacgagacggtcgtctcggcggagcgtctggacgattggatcacc
gaagccgctggcgcaggactcgtcgcaatcaatgtcgaaacgaccttgccggacccgatg
cgttgcgaactcatcggcgtctccctggcgaccgcgcccggacgcgcctgctatattccg
ctgcagcatcgctccggcgactcggctgatcttttttccggcgccaatttggtcgaggga
cagatcccgctcgacgtggccctcgcgcgattgaagccgttgtttgaggacgccgcgatc
ctcaaaatcgcgcacaatatgaagcatgatctgctggttctttcccgctacggaatcgac
gtcgcgccgatcgacgacgccatgctcatgtcctacgcgctggactcggggcgtggcgat
catcgtctcgaagagctggcgcgcaactattgcggccatgacgctctaaccttcgcctcc
gtcgctggcgcgggccgcaattttctcggctttgcccgcgctgcgctcacagcggcgacg
gaatacgccgcggaacaggccgacattgccctgcgcctttggcgcgtgctgaagccgcgg
ctgtcggcggagcgcatgaccacggtctacgagaccttggagcggccgatggtcgccacg
ctcgcgcgcatggagcgaaggggcgtcatggtcgagcgcgcgaccctgtcgcggctctcg
ggcgaatttgcgcaggacatggcgcggctcgaagccgagatcttcgaacttgccggcgag
agtttcaatcttggctcgcccaagcagttgggcgacatacttttcggcaagatgggattg
cccggcgcgaagaaaacggccaccggcgccttgtcgacttccgccagcgttctcgaagac
ctcgccgtcgccggcaatgatttttcgcgccgcattctcgattggcggcagctctccaag
ctcaagagcacctacgccgacgccctgcccggctatatcaacgccgagaccggtcgcgtg
catacgagctatgcgctcgccgccacgacgacaggacggctctcttcatccgagcccaat
ttgcagaacattcccgtgcgcaatgaggccggccgcaaaatacgcaaggcctttgtctcg
gcgcccggccatgtgctgatctcggcggattactcgcagatcgagttgcggctgctcgcc
cacatcgccgacattcctcagctcagacgcgccttcgccgaaaatctcgacattcacgcg
atgacggcgagcgagatgttcaatgtgcccatcaaggacatgccgcccgaaacgcgccgc
cgcgccaaggcgatcaacttcggcatcatctacggcatttccgccttcggcctcgccaat
cagctgagcattccgcgcgaagaggcgagcgcctacatcaagcgctatttcgaacgcttt
cccggcattcgggactatatggactcgacgcgcaagacggtgcgcgagaaaggcgcagtc
tcgaccattttcggccgaatctaccacttccccggcatctcatcggccaatgcgtcggac
cgcgccttctatgagcgcgcggcgatcaacgcgccgatccagggcgcggccgcggacatc
atcagacgcgccatgatacggatggacgacgcgctcattcgcgccggtctttcggcgcag
atgcttctgcaagtgcatgacgagcttgtctttgaagcgccgaacgaggaagcagaggcg
acgatcgaactcgcgcgccgcgtcatggagcaggcgcccgcgcccgccgtccatctcgcc
gtgccgctgaaagtcgatgcgcgcgccgccgccaattgggacgaagcccactga

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