Methylocystis sp. SC2: BN69_1158
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Entry
BN69_1158 CDS
T02324
Name
(GenBank) UvrD/REP helicas
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
msc
Methylocystis sp. SC2
Pathway
msc03420
Nucleotide excision repair
msc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BN69_1158
03430 Mismatch repair
BN69_1158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msc03400
]
BN69_1158
Enzymes [BR:
msc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BN69_1158
DNA repair and recombination proteins [BR:
msc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BN69_1158
MMR (mismatch excision repair)
Other MMR factors
BN69_1158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
DUF3553
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
CCJ06609
LinkDB
All DBs
Position
1233025..1235379
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AA seq
784 aa
AA seq
DB search
MKSSPSPQPDDYTPQSGGLAGRAAASSRPRYLDALNPEQRAAVETLDGPVLVLAGAGTGK
TRALTTRIGHILALGKARAYEILAVTFTNKAAREMRQRVEALVGEGAQAMQWLGTFHAIS
AKILRRHAELVGLKPNFTILDTDDQIRLLKQVLQAENIDDKRWPARALAMRIDGWKNRGL
TPAQVPAGDAESFANGKGAALYALYQERLKVLNAVDFGDLLMESLRLFRDNPDVLADYQR
RFKYILVDEYQDTNVAQYLWLRLIALGRAQGQQNLCCVGDDDQSVYGWRGAEVENILRFE
QDFPGAKVIRLERNYRSTGHILAAASHLISHNEGRLGKTLFTDGDEGEKPTLTGVWDSQE
EARSIGEDIEQLHRRGDSLEEIAILVRASFQMREFEERFVEIGLPYRVIGGPRFYERLEI
RDALAYLRCVAQPADDLAFERIINTPKRGLGDATLQMLHEYARREAIPLMQAARFLVESE
ELKPKPRGALRGLIGDFDRWRTLIDAKPQHELAEQVLDESGYTEMWRSDKTPEAAGRLDN
LKELVRAMEAFPDLESFLEHVSLVMEADSAVDQERVSIMTLHGAKGLEFETVYLPGWEEG
LFPSQRTLDEQGRAGLEEERRLAYVGLTRAKRRAKIYFASNRRIHGLWQATVPSRFIDNL
PSDNVEVVEAPSGSQYGSYGVSRFANLDVYGSDYATPGWKRAQAARGDAGRGEPMRGARG
KQPVTIEGEVIARSSGGSRFSVGARVFHLKFGPGSVAAVDGNKLTVDFDKAGRKMVLESF
VQAG
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcagcccgtcgccccagcccgacgactatacgccccagtccggcgggctcgcc
gggcgcgccgcggcctcgagtcggccgcgctatctcgacgcgctcaatcccgagcagcgc
gccgcggtcgagacgctcgacggtccagtgctcgtgctcgccggcgccggcaccggcaag
acgcgcgccctgacgacgcgcatcggccacatcctcgcgctcggcaaggcccgcgcctat
gaaatcctcgccgtcaccttcaccaacaaggcggcgcgcgagatgcgccagcgcgtggaa
gccctcgtcggcgaaggcgcgcaggccatgcaatggctcggcacttttcacgcgatcagc
gccaagattctgcgccgccacgccgagctcgtcggcttaaagccgaacttcaccattctc
gacacggacgaccagatccgcctcttgaagcaggtgctgcaggccgagaatatcgacgac
aagcgctggccggcgcgcgccctcgccatgcgcatcgacggctggaagaatcgcgggctg
acgccggcgcaggtccccgccggcgacgccgagagcttcgccaacggcaagggcgcggcg
ctttacgcgctctatcaggagcggctcaaggttctgaacgccgtcgatttcggcgatctc
ctgatggagagcctgcggctctttcgcgacaatcccgacgtgctcgccgattatcagcgg
cgcttcaaatatattctggtcgacgaatatcaggacaccaatgtcgcgcaatatctgtgg
ctgcggctgattgcgctgggacgggcgcagggtcagcaaaatctctgctgcgtcggcgac
gacgatcagagcgtctatggctggcgcggcgcagaggttgagaacatcctgcgtttcgag
caggattttcccggcgccaaggtcattcgcctcgagcgcaactaccgctcgacgggacat
atcctcgccgccgcctcgcatctcatctcgcataatgaaggccggcttggcaaaacgctg
ttcaccgatggcgacgagggcgagaagccgacgctgaccggcgtgtgggacagccaggaa
gaggcgcgcagcatcggcgaggacatcgagcaattgcatcgcaggggcgattcgctcgaa
gagatcgccattctcgtgcgcgcctcgtttcagatgcgcgaattcgaagagcgcttcgtc
gaaatcggcctgccctatcgcgtcatcggcggcccgcgcttttacgagcggctcgaaatt
cgcgacgcgctcgcgtatctgcgctgcgtcgcgcagccggccgacgatctcgccttcgag
cgcatcatcaatacgcccaaacgcggcctcggcgacgcgacgctgcagatgctgcatgaa
tatgcacgacgcgaagccattccgctgatgcaagcggcgcgttttctcgttgaaagcgag
gagctgaagccgaagccccgcggcgcgctgcgcggcctcatcggcgatttcgaccgctgg
cgcacgctgatcgatgcaaagccgcagcatgagctcgccgagcaggtgctcgatgagtcc
ggttacaccgagatgtggcgttcggacaagacgcccgaagccgctggacggctcgacaac
ttaaaagagcttgtgcgggcgatggaggcctttcctgacctcgagtccttcctcgaacat
gtgtcgctggtcatggaggctgacagcgccgtcgatcaggagcgcgtctcgatcatgacg
ctgcatggcgcgaagggcctcgagttcgagaccgtctatctgcccggctgggaggaaggg
ctgtttccgagccagcgcacgctcgacgaacagggacgcgcaggattggaagaagagcgt
cgcctcgcctatgtcgggctgacgcgggccaagcgccgcgcgaaaatctatttcgccagc
aaccggcgcattcacgggctgtggcaggcgaccgtgccgtcgcgcttcatcgacaatctg
ccgtcggacaatgtcgaggtggtcgaggcgccgagcgggtcgcaatatggctcctatggc
gtctcgcgcttcgccaatctcgacgtctatggctccgactatgcgacgccgggatggaaa
cgcgcgcaggcggcgcggggcgacgccgggcgcggcgagccgatgcgcggcgcacgcggc
aagcagcccgtgacgatcgagggcgaagtgatcgcgcgctcctcgggcggttcgcgcttt
tcagtcggcgcgcgggtgtttcacttgaagttcgggcccggctcggtggcggcggtcgac
ggcaacaagctcactgtcgatttcgacaaggccggcaggaagatggtgctggagagtttt
gtgcaggcggggtga
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