Methylocystis sp. SC2: BN69_1557
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Entry
BN69_1557 CDS
T02324
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K03086
RNA polymerase primary sigma factor
Organism
msc
Methylocystis sp. SC2
Pathway
msc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
msc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BN69_1557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msc03021
]
BN69_1557
Transcription machinery [BR:
msc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BN69_1557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Phage_DsbA
MTR4-like_stalk
Motif
Other DBs
NCBI-ProteinID:
CCJ07008
LinkDB
All DBs
Position
1629421..1631436
Genome browser
AA seq
671 aa
AA seq
DB search
MAKKDETKVENETVAATEASDGPLLDLNDAAVKRMIKLAKKRGFVTYAELNAVLPSEEVS
SDQIEDVYAMLSEMGITVSEGDDPDDVEADEQNPEEEEPEGGELVESPRATAVATRTSEP
ADRTDDPVRMYLREMGSVELLSREGEIAIAKRIEAGREAMIAGLCESPLTFQAIIIWREE
LEAGKVLLRDIIDLEATYAGPEGKAAKSAEPAPAADLAPATAPRTPPAGLQEDVPPAEET
FEEEDDMENSVSLSAMELELKPKVLETFARIADAYKKLRRLQDQNVENKLKNETLTPAQE
RKYKTLKKEIVADVKSLSLNQNRIEALVEQLYDINKRLIGYETKLLRLADSHGVMREDFI
DKFHGSELDPKWVMRVAKLGSKGWREFVAADKDRIKDLRTEIHALATETGLEISEFRKIV
HMVQKGEREARQAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYR
RGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEE
LSEKLAMPLEKVRKVLKIAKEPISLETPIGDEEDSHLGDFIEDKNAVLPIEAAIQSNLRE
TTTRVLSSLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPS
RSRKLRSFLDN
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaagacgaaactaaggtcgagaacgaaaccgtagcggcgacggaggcttcc
gacggaccgcttctcgatctcaacgacgccgccgtcaagcggatgatcaagctcgcgaaa
aaacgcggttttgtgacctatgccgagctgaacgcggtgctgccgtccgaggaagtgtcg
tcggatcagatcgaggacgtctatgcgatgctctcggaaatgggcatcaccgtctctgaa
ggcgacgatccggacgacgtcgaggccgacgaacaaaaccccgaggaagaagagccggaa
ggcggcgaactcgtcgagagcccgcgcgcgacggcggtggcgacgcgcacgtcggaaccc
gccgatcgcaccgacgaccccgtgcgcatgtatctgcgcgagatgggctcggtcgaactt
ctgtcgcgagaaggcgaaatcgccatcgccaagcgcatcgaggccgggcgcgaggcgatg
atcgccggactctgcgaaagcccattgaccttccaggcgattatcatttggcgcgaggaa
ttggaagcgggcaaggtcctgctgcgcgacatcatcgatctcgaggcgacctacgccggg
cccgagggcaaggcggcgaaatccgctgagccggcgcccgccgccgacctggcgccggcg
acggcgccgcgcaccccgcccgccgggctgcaggaggacgtcccgcccgccgaagaaaca
ttcgaggaagaagacgacatggaaaattccgtgtcgctttcggcgatggaattggaactg
aagccgaaagttctcgaaaccttcgcgcgcatcgccgacgcctataagaagctgcgccga
cttcaggaccagaacgtcgagaacaagctcaagaacgagaccctgacccccgctcaggag
cgcaaatacaagacgctcaagaaggaaatcgtcgccgacgtcaaatcgctgtcgctgaac
cagaaccgcatcgaagcgctggtcgagcagctctacgacatcaacaagcgactcatcggc
tatgagacgaagctcctgcggctcgccgacagccacggcgtgatgcgcgaagacttcatc
gacaagttccacggctcggagctcgatcccaaatgggtcatgcgcgtcgccaagctcggc
tccaagggctggagagaattcgtcgccgcggacaaggatcgcatcaaggatctgcgaacc
gaaattcacgcgcttgcgaccgagacggggctggaaatctccgagttccgcaaaatcgtg
catatggtgcagaagggcgagcgcgaagcccggcaggcgaaaaaggaaatggtcgaggcg
aatctgcgtctcgtgatctccatcgccaagaaatacaccaaccgcggcctgcaattcctc
gatctcatccaggaaggcaacatcggtctgatgaaggccgtcgacaaattcgaatatcgc
cgcggctataaattctcgacctacgccacatggtggattcgccaggcgatcacccgctcg
atcgccgaccaggcgcgcaccatccgcattcccgtgcatatgatcgagacgatcaacaag
atcgtgcgcacctcgcgtcagatgctgcatgagatcggacgcgagccgactccggaagag
ctttccgaaaagctcgccatgccgctcgagaaagtgcgcaaggtgctcaaaatcgccaag
gagccgatctcgctcgaaacgccgatcggcgacgaggaagattcgcatcttggggatttc
atcgaagacaagaacgccgtgctgccgatcgaggcggcgatccagtcgaatctgcgcgag
acgacgacgcgcgtgctctcctcgctgacgccgcgcgaggagcgcgtattgcgcatgcgc
ttcggcatcggcatgaacaccgaccacacgctggaagaagtcggccagcagttctcggtg
acgcgcgagcgcatccgccaaatcgaggcgaaggcgctgcggaagctgaagcatccgagc
cgcagccggaagctacggagctttttggataattga
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