Methylocystis sp. SC2: BN69_1735
Help
Entry
BN69_1735 CDS
T02324
Name
(GenBank) RNA-metabolising metallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
msc
Methylocystis sp. SC2
Pathway
msc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN69_1735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msc03019
]
BN69_1735
Messenger RNA biogenesis [BR:
msc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BN69_1735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
CCJ07186
LinkDB
All DBs
Position
complement(1787999..1789669)
Genome browser
AA seq
556 aa
AA seq
DB search
MTTPEADLVFLPLGGLGEIGMNLALYGYGPPKARKWLMVDCGLGFPGQEAPGVDLVFADI
GFVEKIARDLVGICITHAHEDHIGGLATLWPRLKCKVFATPFAAGLLEVRRLNEPGAPKI
DISLTHAGAKLDLDPFQVEYVAVAHSIPEANALAIRTPLGLLLHTGDWKIDPQPGVGTRI
DEARLRALGDEGVTALICDSTNILREGDSFSEADVARTLRTLIAEAPGRVLVTTFASNIA
RLRGIGEAAQACGRTVVVAGRAMDRAIQVARDCGYLDGLPGFHAPELLPTLPREKTVVIA
TGSQGETRAAMARAAANEHPSIKLVAGDRVIFSSRVIPGNARDVFRVINALCDIGVEVIT
DHDHLVHCSGHPRRGEVRQMYEWVRPQIAVPAHGEAHHLTAHAAFAKAHGVPQVVSARNG
DIVRLAPGAPGIIGKAPHGRLMKDGDVVITDDDGAVRDRVRLSIAGVISIALAVDRKGEL
VGDPDVVFAGVPKRGKFGEEMGEVIDEALFAAFEALSRPRRRDANAVSTAIERAVRGAVS
AVWGKKPTVHVMVVAT
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgccggaagcggaccttgtcttcctgcccctcggcggcctgggcgaaatcggc
atgaatttggcgctctacggctacggaccgccgaaagcgcgcaaatggctgatggtcgac
tgcggcctgggctttccggggcaggaggcgcccggcgtcgacctcgtcttcgcggatatc
ggcttcgtcgagaagatcgcgcgcgatctcgtcggcatttgcatcacccatgcgcatgag
gatcatatcggcgggctcgcgaccctatggccgcggctcaaatgcaaggtgttcgccacg
ccgtttgcggctggcctcctggaagtgcggcggttgaacgagcctggcgcgccgaagatc
gacatttccctcacgcatgccggcgcaaagctcgatctcgatcccttccaggtcgaatat
gtcgctgtcgcgcattcgatcccggaagcgaatgcgctggcgatccgcacgccgctcggc
ctgctgctccacaccggcgattggaagatcgatccgcagcccggcgtcgggacgcggatc
gacgaggcgcggctccgcgcgctgggcgacgagggcgtcaccgcgctcatctgcgactcg
accaatattctgcgcgagggcgacagtttttcggaagccgacgtcgcgcgcacattgcgc
acgctgatcgccgaagcgccgggccgggtgctggtgacgactttcgcgtcgaatatcgcg
cggctgcgcggcatcggcgaagcggcgcaggcctgcgggcgcaccgtcgtcgtcgccgga
agggcgatggatcgcgccatccaggtcgcgcgagactgcggctatctcgacgggctgcca
ggatttcacgcgccggaactgctgccgaccttgccgcgcgaaaagaccgtcgtcatcgcg
accgggagccagggcgagacccgcgccgccatggcgcgggcggcggcgaacgaacatccg
tcgatcaagctcgtcgcgggcgatcgggtgatcttttcgtcgcgcgtcattccaggaaat
gcgcgcgacgtctttcgcgtcatcaacgcgctctgcgacatcggcgtcgaggtcatcacc
gaccatgaccatctcgtgcattgctccggccatccgcgccgcggcgaagtcaggcaaatg
tacgaatgggtccggccgcagatcgccgtgccggcgcatggcgaagcgcatcatctcacg
gcgcacgcggccttcgccaaggcgcatggggtgccgcaggtcgtctcggcgcgcaatggc
gatatcgtgcgactggcgccgggcgcgccgggaatcatcgggaaggccccgcacggccgt
ctgatgaaggatggcgacgtcgtcataaccgacgacgacggcgccgtgcgcgaccgcgtg
cggctgtctatcgccggcgtcatttccatcgcgctggcggtcgaccgcaagggcgagctc
gtcggcgatccggacgtcgtcttcgcgggcgtgccgaaacggggcaaattcggcgaggag
atgggcgaagtcatcgatgaggcgctcttcgccgccttcgaagcgctgtcgcgcccgcga
cgccgcgacgccaacgccgtgtctacggcgatcgagcgcgccgtgcgcggcgccgtatcc
gccgtctggggcaagaagccgactgtgcatgtgatggtcgtcgcgacgtaa
DBGET
integrated database retrieval system
