Methylocystis sp. SC2: BN69_1766
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Entry
BN69_1766 CDS
T02324
Name
(GenBank) Double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
msc
Methylocystis sp. SC2
Brite
KEGG Orthology (KO) [BR:
msc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msc03400
]
BN69_1766
Enzymes [BR:
msc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BN69_1766
DNA repair and recombination proteins [BR:
msc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BN69_1766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
Viral_helicase1
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
CCJ07217
UniProt:
J7Q8Q5
LinkDB
All DBs
Position
complement(1820874..1824320)
Genome browser
AA seq
1148 aa
AA seq
DB search
MSERPVGALTIRRQQTASDPFTSAWVSAHAGSGKTHVLAQRVLRLLLAGARPSQILCLTY
TKAAAANMGSRVFDALARWATLDDATLANDIAQMGATVESRIDLDFARRLFARAVETPGG
LKIQTIHAFCEKLLHVFPFEANVPASFRVVDDLERAELMDAARRRALDAATRDDGSLRKA
LELVARETSAAGFDALCEELLHHRQDIARMREQDDYEARVFAALGLTTDETLTRIDAAII
EDGEPPSAWPALAKMLRGGSTNDGKLADSLEAAAALAPHPDCIESYLAAFFKTDGEPRGL
GKTRIITGPLARREPQLLARMEAERDRLVTLIEKRMAAAAAERSLALHVLGDAILSEYEH
AKRRRGLLDYDDLIEGARRLLHRSSPSWVLYKLDAQIDHILLDEAQDTSSAQWDILAAIA
DEFCAGASAREAKGGPPRSFFAVGDEKQSIFSFQGAAPERFGEMRREFGRRFECVNRRFE
LVTLTQSFRSSPGVLQAVDDIFAIDENRLGLCGDPQEPAPRHEAWKSDVAALIEIWEPIG
AEKAQDQSDWRLPLDYVDASDPNERLAEKLARKVRALLAPQSGECVEDGGALRPVEAGDI
LVLVRKRGPLFEAIIRALKNEQVPVAGADRLNLADHIAVHDLIALGRAALLPEDDLTLAS
VLKSPFFGFDDDDLIALAPGRRASLVEALERSDDARGREVAARLRRLRRDAAALTPFDFY
SSVLGPEGGRARLMSRLGGEADDAIDEFLKLAASFEREQPPSLTAFLAMAESLDLSIKRD
MESAGAAVRVMTAHAAKGLEAKIVFLPDTCGAPAGKHDPKLYALGEADEAALLWSIGKDS
DPIALQEAREAHRRGERAESQRLLYVALTRAEERLYICGAHGVNGRADGCWYDAIRDALD
SRCETLPDPLDATSTILRRGAVAPRFDLSRRAPPAAAVDIPAFAKTKARPEVAPPPPLRP
SGALAGADFIADGADGAAARRGEAERLLNGRLVHALLQHLPACATEHRQSVARRFLSARG
GFLDEDRREALAQSALAILADPRLAPLFGPDSTPEVDIVATLENGAVISGRIDRLVETAT
EALIAEFKTGRPRGRIEDAHVRQLALYRAAVASLFPGKRLRCFLIYTQNASVFEADESAL
AAALERAL
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcgtcccgttggcgcgctgacgatccggcgccagcaaacggcctcagatccg
ttcacgtccgcctgggtgtcggcgcatgcagggtccggcaaaacgcatgtgctcgcacag
cgcgttttgcggctgctgctcgcgggcgcgcggccgtcgcagattctctgcctcacctat
acgaaggcggccgccgccaatatgggatcgcgggtctttgacgcgctcgcgcgctgggcg
acgctcgacgatgcgacgctggccaatgacatcgctcagatgggcgcgaccgtcgagtcg
cgcatcgatcttgatttcgcccggcggctgttcgcgcgcgccgtcgagacgcctggcgga
ctcaagatccagaccatccacgctttctgcgaaaagctgctgcatgtctttcccttcgaa
gccaatgttccggcgtccttccgcgtcgtcgatgatctggagcgcgccgagctgatggac
gcggcgcgacggcgcgcgctcgatgccgccacgcgagacgatggatcgctgcgaaaagcg
ctggagcttgtcgcccgcgagacgtcggccgcgggattcgacgcgctctgcgaggaattg
ctgcatcaccgtcaagacatcgcgcgcatgcgcgagcaggacgattacgaggcgcgtgtc
ttcgccgcgcttggtctgacgacagacgaaacgctgacgcgaatcgacgcggcgatcatc
gaggacggcgagccgccgtcggcgtggccggcgctcgccaaaatgctgcgcggcggttcg
accaacgacggcaaactcgccgactcgcttgaggccgcagcggctcttgccccgcatccc
gactgtatcgagagctatctcgcagccttcttcaaaacagacggcgaaccgcgcggcctg
gggaaaacaagaatcatcaccggcccgctcgccaggcgcgaaccgcagctcctcgcgcgc
atggaggccgagcgcgacaggctcgtcacgctcatcgaaaagcgcatggccgccgccgcg
gccgaacgctcgctggcgctgcatgttctcggcgacgccatcttgagcgaatatgagcat
gccaaaagacgtcggggactactcgactacgacgatttgatcgagggcgcgcggcgcctg
cttcatcgttcgagcccatcctgggtgctctataagcttgacgcgcagattgatcacatc
ctgctcgatgaggcgcaggatacgagttcggcgcagtgggacatattagcggcgatcgcc
gacgaattttgcgcaggcgccagcgcgcgcgaagccaagggcggtccgccgcgcagcttt
tttgcggtcggcgacgagaagcaatcgatcttttccttccaaggcgcggcgcccgaaaga
tttggcgagatgcggcgcgagtttggccgtagattcgaatgcgtcaaccgccgtttcgaa
ttggtgacgctcacgcaatctttccgttcttcgcccggcgtgctgcaagcggtcgacgat
attttcgcgatcgatgaaaatcgcctcggcctgtgcggcgatccgcaggagccggcgcca
aggcacgaggcttggaaatccgatgtcgcggcgctcatcgaaatctgggagccgatcggc
gcggaaaaagcgcaggaccagagcgattggcgcctgccgctcgactatgtcgacgcgagc
gaccccaatgagcgtctcgcggaaaaattggcgcgcaaggtcagggcgctgcttgcgcct
cagagcggcgaatgcgtcgaagacggcggcgcgctgcgtcccgtcgaggccggcgacata
ttggttctcgtgcgcaaacgtggtccgctcttcgaggcgatcattcgcgcattgaaaaac
gaacaggtccccgtggccggcgccgaccgactcaatctggccgaccatatcgccgtccac
gatctcatcgcgcttggacgcgccgcgttgttgccggaagacgatctgacgctggcgagc
gtcctgaaatcgcccttcttcggcttcgacgacgacgatctcatcgcgctcgcgcccggc
cgtcgcgcctcactggtcgaagcgcttgaacgatctgacgacgcgcgcggccgcgaggtc
gccgcgcgcctgcgacgtttgcggcgcgacgccgcggcgctaacgccattcgatttttac
agcagcgttcttggcccggagggcggacgcgcgcggctcatgtcgaggctgggcggcgaa
gcagacgacgcgatcgacgaatttttaaagctcgccgcgagtttcgagcgcgaacagccg
ccgtcgctcacagcctttctggcgatggccgagtcgctcgatctttcgatcaagcgcgat
atggaatcggccggcgcggccgtgcgggtgatgaccgctcatgcggcgaagggtctggag
gcgaagatcgtttttctgcccgacacctgcggcgcacccgccggcaagcacgatcccaag
ctctatgcgctcggcgaggctgacgaagcggcgctcctctggtcgatcggcaaggacagc
gacccgatcgcactccaggaagcgcgcgaagcgcatcggcgcggcgaacgcgcggaaagc
cagcgcctgctctatgtcgcgctgacccgcgccgaggagcggctgtatatttgcggcgct
catggcgtcaacggtcgcgccgacggctgctggtacgacgccatacgcgacgcgctggac
tcgcgctgcgagactttgccagacccgctcgatgccacatcgacgattctgcgtcgcggc
gcggttgcgccgcgcttcgatctttcgagaagagcgccgccggccgccgccgtcgacatt
ccggccttcgccaagaccaaggcgcggcctgaagttgcgccgccgccgccgctgcgtccc
tcgggcgcgctcgccggcgcggacttcatcgcggacggcgcggacggcgcggctgcgcgc
cgaggcgaagcggaacgtctgctgaacggccgtctggtccatgcgctgttgcagcatctg
ccggcctgcgcgacggaacatcggcaaagcgtcgcccggcgttttctttcggcgcgcggc
ggctttctggacgaagacaggcgagaggcgctcgcgcagtcggcgctggcgatcctcgcc
gacccgcgtcttgcgccgctctttggcccggactcgactcctgaggtcgacatcgtcgcg
acgctcgaaaacggtgccgtcatttccggccgcatcgaccggcttgtcgaaaccgcgacc
gaagcgctcatcgccgaattcaagacaggcaggccgcgcggcagaatcgaagacgcgcat
gtgcgccagctcgcgctctatcgcgctgcggtcgcctcgctctttcccggcaagcggctg
cgctgctttctgatctatacgcagaacgccagcgtgtttgaggccgatgaatcggcgctt
gccgccgcgctcgaaagggcgctttga
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