Methylocystis sp. SC2: BN69_1905
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Entry
BN69_1905 CDS
T02324
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
msc
Methylocystis sp. SC2
Brite
KEGG Orthology (KO) [BR:
msc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msc03016
]
BN69_1905
Enzymes [BR:
msc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
BN69_1905
Transfer RNA biogenesis [BR:
msc03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
BN69_1905
Prokaryotic type
BN69_1905
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
CCJ07356
LinkDB
All DBs
Position
1969842..1970882
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AA seq
346 aa
AA seq
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MPRHFDPALINDPFDDPGLYVDLVFEKRALLFDLGDLARLSPRKMLRISDVFVTHLHMDH
FAGFDQLLRRLLGREMTLGVYGPPGIIDAVEHKLKAYSWNLIGGYEGNLTFRVTEMDESG
RAASAAFSGRTQFARRDEEKRQSSEGLLLKESGILVRATILDHGLPALAFALEERAHINV
WRNKLDALGLAVGPWLRAFKAATLAGADDLALIKVAWADAEDKKPDALPFGLLKKEIMKI
SSGRKIAYVVDCAYTECNIERIIKLAKGADTLFIEGGFLERDSAAASKRRHLTARQAGTI
ARRAGVKRLVTFHYSPRYKGEGAALAREAQDAFLRAGSEKVDRLFR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcgccacttcgaccctgcgctgatcaacgaccctttcgacgatccgggtctttac
gtcgatctcgtgttcgaaaagcgggcgctgctgttcgatcttggcgatcttgcacggctt
tcgccccgcaagatgctgcgaatcagcgacgtcttcgtcacgcatttgcatatggaccat
ttcgcgggcttcgatcagctgttgcggcggctgctcgggcgggaaatgacgcttggcgtt
tacggaccgccggggatcatcgacgcggtcgagcataagctcaaagcctattcctggaac
ctcatcggcggctatgagggcaatctgacgttccgggtgaccgaaatggacgaatccggg
cgcgcggcttccgcggcattttcgggtcgaacgcagtttgcgcgtcgcgacgaagagaag
cgccaatcgagcgagggactgctgctgaaagaatccggcatactggttcgcgccacgatt
cttgatcatggccttccggcgctggcgttcgcgctggaggagcgcgcgcatatcaacgtt
tggcgcaacaagctggatgcgttggggctcgccgtgggcccgtggctgcgggcgttcaaa
gcggcgacgctcgccggcgccgatgatttggccctcatcaaggtcgcctgggccgacgcg
gaagacaagaaacccgacgccctgcccttcgggttgctcaagaaggagatcatgaagatc
tcctcgggccgcaagatcgcctatgtcgtcgattgcgcctataccgaatgcaacatcgaa
cgaatcataaagctcgcgaaaggcgcggacacgctcttcatcgaaggcggatttttggag
cgcgactcggccgccgcgtccaagcgacgacatctgacggcgcgtcaggcgggaacgatc
gcgcgccgcgccggcgtgaagcggctcgtgaccttccattactcgccgcgctacaaaggc
gagggcgcggcgcttgcgcgggaagctcaggacgcgtttcttagagcaggttccgaaaaa
gttgacagactttttcgatga
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