Methylocystis hydrogenophila: BN69_2020
Help
Entry
BN69_2020 CDS
T02324
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
msc
Methylocystis hydrogenophila
Pathway
msc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BN69_2020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msc03400
]
BN69_2020
Enzymes [BR:
msc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BN69_2020
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BN69_2020
DNA repair and recombination proteins [BR:
msc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BN69_2020
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
IBR
Motif
Other DBs
NCBI-ProteinID:
CCJ07471
LinkDB
All DBs
Position
2091915..2092784
Genome browser
AA seq
289 aa
AA seq
DB search
MPELPEVETVRRGLAPALIGATIERVELRRRDLRFPFPERFAARLQDRRVLDLRRRAKYL
LADLDDGHSLIMHLGMSGSFRIDEETPGAFHHKRDKNAAHDHVVLHLGHARRIVYNDPRR
FGYMLLIATHAIDADKLFRGLGVEPLSGALDAALLARAFRGRAAPAKALLLDQRLIAGLG
NIYVCEALHRAHISPLRAAGSLVLASGRPTAALARLPQAIKDILTDALKAGGSSLRDHRQ
IDGSLGYFQHSFRVYDREGAACPTPGCKGTIVRVVQSGRSTFYCPACQT
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgccagagctgcctgaagtcgaaaccgtgcgacggggattggcgcccgcgctcattggc
gcgacgatcgagcgcgtcgagctgaggcgccgcgatctgcgctttcccttccccgaacgc
tttgccgcgcgtcttcaggaccggcgcgtcctcgaccttcgccgccgcgcgaaatatctc
ctcgccgatctcgacgacggccattcgctgatcatgcatcttggcatgagcggctcgttt
cgcatcgacgaagaaacgccaggcgcgtttcatcacaagcgcgacaaaaacgccgcgcat
gaccatgtcgtcttgcatctcggtcacgcgcggcgcatcgtctataacgacccgcgccgt
ttcggctacatgctgctcatcgccacgcatgcgatcgatgcggacaagctctttcgcggc
ctcggggtcgaacctttgagcggggcgctcgacgccgcgttgctcgcccgcgcctttcgc
ggacgcgcggcgccggcgaaggcgctgctgctcgaccagcgcctgatcgccggcctcggc
aacatttacgtgtgcgaggcgctgcatcgcgcgcatatttcgccgctgcgcgcggcggga
tcgctcgttctcgccagcggccggccgacggcggcgctggcgcggctgccgcaggcgatc
aaggatattttgacggatgcgctgaaggcgggcggctcgtccttacgcgatcatcgccag
atcgacggctccctcggctatttccagcatagtttccgcgtctacgaccgcgaaggcgcc
gcctgcccgacgccgggctgcaagggcacgatcgtgcgcgtagttcaatcggggcgctcg
accttttattgtcctgcgtgccagacgtga
DBGET
integrated database retrieval system
