Methylocystis sp. SC2: BN69_2160
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Entry
BN69_2160 CDS
T02324
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
msc
Methylocystis sp. SC2
Pathway
msc03030
DNA replication
msc03430
Mismatch repair
msc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN69_2160
03430 Mismatch repair
BN69_2160
03440 Homologous recombination
BN69_2160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msc03032
]
BN69_2160
03400 DNA repair and recombination proteins [BR:
msc03400
]
BN69_2160
Enzymes [BR:
msc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN69_2160
DNA replication proteins [BR:
msc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BN69_2160
DNA repair and recombination proteins [BR:
msc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BN69_2160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
DUF3717
Motif
Other DBs
NCBI-ProteinID:
CCJ07611
UniProt:
J7QHH3
LinkDB
All DBs
Position
complement(2227548..2228264)
Genome browser
AA seq
238 aa
AA seq
DB search
MREIVLDTETTGLDPSSGHRVVEIGAVEISNLIPTGRHFHCYVDPERDMPDEAFRVHGLS
REFLAQHKIFKEIAAEFLDFIEDAPLVIHNAEFDTRFLNAEFALMNLPPLGGGRIIDTLA
MARRRHPGGPNSLDALCQRYAIDLSRREKHGALLDANLLAEVYAELCGGRQSALSLQTVH
AVRIAALNDLLRRRPEPLPPRLSAVEETAHSAFVATIKSPIWERYIASDEDSAPSVVR
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgcgggagatcgttctcgatactgaaacgacggggctcgatccgtcgagcgggcatcgc
gtggtcgaaatcggcgcggtcgagatttccaatctcatcccgacaggccggcatttccac
tgctacgtcgatccggaacgcgacatgccggacgaggccttccgggtgcatggcctctcg
cgcgaatttctggcgcagcacaagatcttcaaggaaatcgccgctgaatttctcgacttt
atcgaggatgcgccgctggtcattcacaacgctgaattcgatacgcgctttctcaacgcc
gaattcgcgctcatgaatttgccgccgctcggcggcgggcgcatcatcgacacgctcgcc
atggcgcgccgccgtcatcctggcggcccgaattctctcgacgccttgtgtcagcgctac
gcgatcgatctctcgcggcgcgaaaagcatggcgctctgctcgacgccaatctcctcgcc
gaggtctatgccgagctttgcggcggacggcagtcggcgctgtcgcttcagaccgttcac
gcggtgcgcatcgccgccttgaacgatctgctgcgccgtcgccccgagccgctcccgccg
cgactaagcgcggtcgaagagacggcccactccgcctttgtcgcgacgatcaaatcgccg
atctgggagcgctatatcgcaagcgacgaagattccgcgccgagcgtcgttcgctaa
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