Methylocystis sp. SC2: BN69_2611
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Entry
BN69_2611 CDS
T02324
Symbol
nifA
Name
(GenBank) Nif-specific regulatory protein
KO
K02584
Nif-specific regulatory protein
Organism
msc
Methylocystis sp. SC2
Pathway
msc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
msc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BN69_2611 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msc03000
]
BN69_2611 (nifA)
Transcription factors [BR:
msc03000
]
Prokaryotic type
Helix-turn-helix
Other families
BN69_2611 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_5
GAF_2
AAA_2
GAF_3
AAA
Mg_chelatase
AAA_3
bpMoxR
UPF0175
AAA_16
Motif
Other DBs
NCBI-ProteinID:
CCJ08062
UniProt:
J7Q9M1
LinkDB
All DBs
Position
2700941..2702782
Genome browser
AA seq
613 aa
AA seq
DB search
MCERKPWLQADGGCSRKAAMDDVATSRSLLTEGMAAKPPRARPPSADTALLGIYEISKIL
TAPARLEQTLGNVVAVLSSFLDMKLGMITILDQHGNPEIVATSGWTSRDGGRPIDTLPTK
VIDRLVATAMPVIVEDVSRDPLFATAAGTITRAIGAKVSFLAVAIKSDSRVVGTLSINRT
SEDWISYAFDADLRLLTMIANLIGQTVKLHRMFSADRQRLLNECSTLEKALVSCLPKEIR
GERPDVPGIIGESPAIMEVLDTIAIVAKSNSTVLLRGESGTGKELFARAVHDLSRRSAKP
FVKLNCAALPESVLESELFGHERGAFTGAVAQRAGRFELANGGTLLLDEIGEISPAFQAK
LLRVLQEGEFERVGGSKTLKVNVRFVFATNKNLEEAVDKGEFRADLYYRISVVPVFLPPL
RERPGDVSLLAQNFIEKFNSENDQRHELSASAIETLQRCYFPGNVRELENCVRRTATLAR
DETIVDHDFACASGKCLSALLWTSSASGAYQHAHAEPSGLRAPAPPEEIASASRGAAASA
STFVGEASSRLDAAGEEEGDGFASSRKMIDRERLIEGMEKAAWVQAKAARLLGLSLRQVN
YALKKYNIEIKRI
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgaacggaaaccgtggctccaggctgacggcggctgttcgaggaaggcggccatg
gacgacgtagccacttcacgctctctgctcacggaaggcatggcggcaaagccgccgcgg
gcgagacccccgtccgccgatacggcgctgctcggcatttatgaaatctcgaaaatcctg
accgcgccggcccgtctcgagcagacgctgggcaatgtcgtcgccgtgctcagctctttc
ctcgatatgaaattggggatgatcacgatccttgatcagcacggcaatccggagatcgtc
gcgacctcgggttggaccagccgcgacggcggcaggccgatcgacacgctgccgaccaag
gttatcgaccggcttgtcgccaccgccatgcccgtcattgtcgaggacgtgtcccgcgac
cccttgttcgcgacggccgcggggacgatcacccgggcgatcggcgcgaaagtctccttc
ctcgccgttgcgatcaagagcgatagccgcgtcgtcgggacgctgtcgatcaatcgcacg
tcagaagattggatctcctacgcgttcgacgccgatctgcgcttattgacgatgatcgcc
aatctgatcggccaaacggtgaagctgcaccgcatgttttcggccgaccggcagcggctg
ctgaatgaatgcagcacgctggagaaggcgctggtctcgtgcctgcccaaggagattcgt
ggagagcggcccgacgtccccggcatcatcggcgagagcccggcgatcatggaagtgctc
gacaccatcgccatcgtcgcgaagtccaattcgaccgtgctgctgcgcggcgagagcggc
acaggcaaggagctttttgcacgcgcggtgcacgacttgtcgcgccgcagcgccaagccc
ttcgtcaagctgaactgcgccgcgctgccggaaagcgtcctcgaatcggagctgttcggg
catgaacggggcgcgttcacgggcgccgtcgcgcagcgcgcggggcgcttcgaactggcc
aatggcggcacgctgctgctcgacgaaatcggcgaaatctctcccgccttccaggcgaag
ctgctgcgcgtgctgcaggaaggcgaattcgagcgggttggcggatcgaagaccttgaaa
gtcaatgtccgattcgttttcgcgaccaacaagaatctcgaagaggccgtcgacaagggc
gagttccgcgccgacctctattaccgcatcagcgtcgtgccggtgttcctgccgccgctg
cgcgaaaggcctggcgacgtttcgctgttggcgcagaatttcatcgagaagttcaacagc
gaaaatgatcaaaggcacgaactctcggcgagcgccatcgagacgctgcaacgctgctac
ttcccgggcaatgtgcgcgaactggaaaactgcgtgcgccgcacggcgaccttggcgcgc
gacgaaaccatcgtcgatcatgatttcgcctgcgcctctggcaaatgcctttcggcgttg
ctgtggaccagcagcgccagcggcgcctatcagcatgcgcatgccgaaccgtccggcctg
cgcgcccccgctccgcctgaggagatcgcgtcggcgagccgcggcgcggctgcgtcggcg
tcgaccttcgtcggagaggcctcgtcgcggctggacgccgccggggaggaggagggcgac
gggtttgcgtcctcccgcaagatgatcgaccgcgagcgcctcatcgagggcatggagaag
gccgcctgggtccaggccaaggctgcgcgtctgctcggcctgtcgctgcgccaggtcaat
tatgcgctgaagaaatacaacatcgaaataaagcgcatctga
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