Mucispirillum schaedleri: N508_000071
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Entry
N508_000071 CDS
T08201
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
msch
Mucispirillum schaedleri
Pathway
msch03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msch00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N508_000071 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msch03019
]
N508_000071 (pnp)
03016 Transfer RNA biogenesis [BR:
msch03016
]
N508_000071 (pnp)
Enzymes [BR:
msch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
N508_000071 (pnp)
Messenger RNA biogenesis [BR:
msch03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
N508_000071 (pnp)
Transfer RNA biogenesis [BR:
msch03016
]
Prokaryotic type
tRNA degradation factors
N508_000071 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
S1
PNPase
KH-I_KHDC4-BBP
KH_2
KH_NusA_1st
DUF655
KH_KhpA-B
PFam54_60
KH_NusA_2nd
S1_2
Motif
Other DBs
NCBI-ProteinID:
USF23018
UniProt:
V2QD13
LinkDB
All DBs
Position
59792..61921
Genome browser
AA seq
709 aa
AA seq
DB search
MEKNIHSYEISLPGCAEPIIFETGWKAKQANGSIWIKQGGTVVLVTAVAGKAPEAYQDFF
PLTVNYIEKMYSVGKIPGGYVKRETKPSDRETLISRLIDRPLRPLFDDGFRNETQVVATV
LSADSIGLPDILALNAASAALMISDIPFSMAVGGVRIGKLNGELIINPPVKLHEKLSMNI
VVAGTKDAIAMVEAGMNGVTEDEVIEALEYGHEQIKKLVEVQERMAAEIGKPKMEYPDFS
LPKDLVQEAYEKFSAAFKDAFDVKGKLESYEAIDKVKEEYLAYVLETRGEDEFEANKGIY
KDIAKEVEKIVFRNSLVKTHKRADGRALDEIRPIDIEVGVLPMAHGSALFTRGETQALVV
ATLGSKNDSQTLESIEGVSNKSFMLQYNFPPFSVGEVGRIGAPGRREIGHGALAERALSA
VVPNDSSFPYSVRVVSEILESNGSSSMATVCGGALSMMDAGLQITAPVAGVAMGLVMEED
GDYVVLTDIMGLEDHLGDMDFKVAGTETGITALQMDIKIKGLSKEILTKALAQAKEGRLF
ILNKYKEVLPEPRKDLNPNAPRVFTMNINPDKTGALIGPQGKNIKAIVEATGASIDILDG
GIVNIFGKNQATIDNAVNMIEATIAEAVVGKTYTAKVKKVMEYGAFVEILPGLEGLLHVS
QYAHERIPSIADYLKVGDKVDVMYMGKDRNGRMELSRKALLPKPEKAEK
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaatattcattcctatgaaataagcttgccaggttgtgctgagcctattatt
tttgaaacaggttggaaagcaaaacaggctaacggaagtatttggataaaacaaggtgga
acagtagttttagttactgctgttgcaggtaaggcacctgaagcttatcaagattttttc
ccacttactgttaactatattgaaaaaatgtattctgttgggaaaattccaggtggatat
gttaaaagagaaactaaaccaagcgatagggaaactcttatctctcgcttaattgaccgt
cctttacgcccattatttgatgacggttttcgtaatgagactcaggtggtggctacagtt
ttgtcggctgatagtattggtctgcctgatattctggctttaaatgctgctagtgctgca
ttgatgatttccgacataccttttagtatggcagttggcggagttcgtattggtaagctg
aatggggaattaattataaacccaccagttaaactgcacgaaaaactttctatgaatata
gtagttgcaggaacgaaagatgctattgcaatggtggaagccggtatgaacggcgtcact
gaagatgaagttattgaagctcttgaatatggtcatgagcagataaaaaaacttgttgaa
gttcaggaaagaatggctgcagaaattggtaaaccaaaaatggaataccctgatttctca
ttaccaaaagatttagttcaggaagcctatgaaaaatttagtgcggcttttaaagatgct
tttgatgtaaaaggtaagcttgaatcttatgaagctattgacaaggttaaagaagaatat
ttggcctatgttttagaaactcgtggtgaagacgagtttgaagcaaacaaaggaatttat
aaagatatagcaaaagaagttgaaaaaatagtattcagaaactcacttgtgaaaactcat
aaaagagcagacggcagggcacttgatgaaatccgtcctattgatattgaagtaggtgtg
cttcctatggctcacggttcagctctttttacaaggggtgaaactcaggcattagttgta
gcaactcttggctcaaaaaatgacagccagacacttgaaagtattgaaggtgtaagcaat
aaatcttttatgctgcaatataactttccgccattttctgttggtgaagttggtagaatt
ggtgctcctggcaggcgtgaaatcggccatggtgcattagctgagcgtgctttatcagct
gttgttcctaatgacagcagttttccttattcagtaagggttgtttctgaaatattagaa
tcaaatggttcttcatctatggcaacagtttgtggtggtgcattatctatgatggatgct
ggtttgcagattacggcgcctgttgcaggtgttgctatgggtttagtaatggaagaagat
ggcgactatgttgtcttaacagatattatggggcttgaagaccaccttggtgatatggac
tttaaggtagcaggaacagaaactggtattactgcactgcaaatggatattaaaatcaaa
ggcttatctaaagaaattttaacaaaagctttagctcaggcaaaagaaggcagattattt
attttaaataaatataaagaagttcttccagagcctagaaaagatttaaatcctaatgct
ccaagagtgtttacaatgaatattaatcctgataaaacaggtgctttaattggtccgcag
ggcaaaaacattaaagctattgtagaagcaacaggagcgagcattgatatattagatggc
ggtattgttaatatatttggcaaaaatcaggcaactattgataatgctgttaatatgatt
gaggcaactattgcagaagctgttgttggtaaaacttatactgcaaaagtcaaaaaagtt
atggaatatggtgcatttgtagaaatacttccagggcttgaaggtttgctgcatgtatct
cagtatgctcatgaaagaataccatccattgcagactatttaaaagtaggcgataaagta
gatgttatgtatatgggtaaagatagaaacggcagaatggagctttctagaaaagcactt
ttgccaaaaccagaaaaagcagaaaagtaa
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