Mucispirillum schaedleri: N508_000103
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Entry
N508_000103 CDS
T08201
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
msch
Mucispirillum schaedleri
Brite
KEGG Orthology (KO) [BR:
msch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msch03019
]
N508_000103 (yhaM)
Messenger RNA biogenesis [BR:
msch03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
N508_000103 (yhaM)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
tRNA_anti_2
TraI_2
Cas3_HD
HD_3
HDOD
Motif
Other DBs
NCBI-ProteinID:
USF23048
UniProt:
V2QCY1
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All DBs
Position
87383..88318
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AA seq
311 aa
AA seq
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MDLGITKKYMIFNLVTNTTKDNRPFIRMTLTDTDGGSMNAIMFDSNKLSFEPARGQVVNV
TGALQQYNGVTQLKVSDMVLLEGEDANEFLPKSDKDAKAMEDELKAVLQKHIKSSYFKSL
CNAFYADKAAYTLFKKSSAAKSVHHAYIHGLLEHTLSMVKLSALICDFYGKENVNKELTV
MGALFHDIGKIQEIDIDNSFEYTDEGKLLGHLLLGINMVDKYIESIPDFPKKARDLLIHL
IASHHGLLEYGSPKRPKTKEAFILHYVDNIDARINSFNMAFERENVEEGGWSQYDRILER
QFYNHGLIPEE
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggatttaggaattacaaaaaaatatatgatttttaaccttgttacaaatacaactaag
gataacagaccttttattcgtatgactcttacagatacagatggcggtagtatgaatgct
ataatgtttgacagtaacaaactttcttttgaacctgcacgaggtcaggtggtgaatgtt
acaggagctttgcagcagtataatggtgtaactcagctaaaagtcagtgatatggtttta
cttgaaggggaagatgctaatgaatttcttccaaaatctgataaagatgcaaaagctatg
gaagatgaattaaaggctgttttgcagaagcatattaaaagttcttattttaaaagcctt
tgcaatgctttttatgcagataaggcagcatatactctttttaaaaaatcttctgctgct
aaaagtgttcatcatgcttatattcatggcttattagagcatacattatctatggtaaaa
ttatctgcattaatatgtgatttttatggaaaagaaaatgttaataaagagcttactgtt
atgggtgcattgtttcatgatataggtaaaattcaagaaattgatatagataattcattt
gaatatacagatgaaggcaaacttttaggtcatttactgcttggtataaatatggttgat
aaatatattgaaagtatacctgattttccaaaaaaagcacgagatttacttattcactta
atagcaagccaccatggtttattagaatatggctctccaaaacggccaaaaacaaaagaa
gcttttattctgcattatgttgataatatagatgcaagaataaattcatttaatatggca
tttgaaagagaaaatgttgaagaaggcggctggagccagtatgacagaatattagagcgt
cagttttataatcatggtttaatacctgaggaataa
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