Mucispirillum schaedleri: N508_000239
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Entry
N508_000239 CDS
T08201
Symbol
lcfB_1
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
msch
Mucispirillum schaedleri
Pathway
msch00061
Fatty acid biosynthesis
msch00071
Fatty acid degradation
msch01100
Metabolic pathways
msch01212
Fatty acid metabolism
msch02024
Quorum sensing
msch04146
Peroxisome
Module
msch_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
msch00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
N508_000239 (lcfB_1)
00071 Fatty acid degradation
N508_000239 (lcfB_1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
N508_000239 (lcfB_1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
N508_000239 (lcfB_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
msch01004
]
N508_000239 (lcfB_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msch04147
]
N508_000239 (lcfB_1)
Enzymes [BR:
msch01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
N508_000239 (lcfB_1)
Lipid biosynthesis proteins [BR:
msch01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
N508_000239 (lcfB_1)
Exosome [BR:
msch04147
]
Exosomal proteins
Exosomal proteins of breast milk
N508_000239 (lcfB_1)
Exosomal proteins of breast cancer cells
N508_000239 (lcfB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DNA_PPF
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
USF23183
UniProt:
V2Q983
LinkDB
All DBs
Position
228732..230321
Genome browser
AA seq
529 aa
AA seq
DB search
MIFRRKQEEVAKPKTIADILTYQSYKNGSKKYIFFKDIIYTYSQAEKICNKISRVLAFSG
IRKGDRVAIMMENSPYFIFAAFAIAKAGGIIVPVNTFLKDKEVSYIISNSEAAAIFTSEK
FKGIISKVKEDCSCLQSIFSFDDSAANWGAENVLVKDKNMSELPLEIGIKQEDTAVIIYT
SGTTGAPKGAMLSHGNLISMVEMAAISYKMTHKDRFLLFLPMFHIYSFEVTIMFPSFLGA
SIVILESVMDLKTKKFRDILIFKRPTVMAAVPTVYSALVKAKMPKLFIKFIYPIKIHLCS
GSGLPVDIYNKFYQKFGIPLIEGYGLSEASPVVAGNTLDDPRAGTVGRAFYGVSVKIVDK
DDMEVPRGEVGEIIAKGPNIMQGYWKMPKETAEAVKNGWFFTGDLGTMDNDGFITIVDRK
KDLILVKGMNVYPREIEEHIHHIKGVEAVAVISVPDEDGDETILAYIKKDPDVNITEKDI
KAYLKKYIANFKIPKYVYFPNELPLTTIGKILKRKLKEMVMKGEIEGIK
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgatatttagacgcaaacaagaagaggttgcaaaacctaaaactattgctgatatttta
acatatcagtcatacaaaaatggcagtaaaaaatatatcttttttaaagatattatttat
acttattcgcaggctgaaaaaatatgtaataaaatatcccgagtgcttgctttttctggt
attcgtaaaggtgatagagttgccataatgatggaaaactcaccttattttatttttgct
gcttttgcaatagctaaagcaggtggcataattgtgcctgtaaatacttttttaaaagat
aaagaagtaagctatataatttctaacagcgaagcagcagcaatatttacttctgaaaaa
tttaaaggaataataagcaaagttaaagaagactgctcttgtttacagtccattttttca
tttgatgacagtgctgcaaactggggtgctgagaatgtattagtaaaagataaaaatatg
agcgagctgccgcttgaaataggtataaaacaggaagatactgcagttattatttataca
tctggcacaacaggtgctccaaaaggtgcaatgctctctcatggtaatttaataagtatg
gtggaaatggctgctatatcttataaaatgacacataaagacagatttttactgttttta
ccaatgtttcatatatattcttttgaagtaactataatgtttccatcatttttaggtgca
tctattgttattttagaatcagttatggatttaaaaactaaaaaattcagagatatatta
atatttaaacggcctactgtaatggcagcagtgccaacagtttattctgctcttgtaaaa
gcaaaaatgccaaaactttttattaaatttatctatcctataaaaatacacttatgcagc
ggctcaggtctgcctgttgatatttataataaattttatcaaaaatttggcattccttta
attgaaggttacgggctttcagaagcttctccagttgtagcaggcaacactcttgatgac
cctagagctggcacagttggcagagcattttatggggtatctgttaaaattgttgataaa
gatgatatggaagtgccaagaggtgaagttggagagattatagctaaaggtcctaatatt
atgcagggatactggaaaatgccaaaagaaactgctgaagctgtaaaaaatggctggttt
tttacaggcgatttaggaactatggataatgatggctttatcaccattgttgatagaaaa
aaagacttaatattggttaaagggatgaatgtttatcctagagagatagaagaacatatc
catcatataaaaggtgtagaagctgttgctgttatcagtgtgcctgatgaagatggtgat
gaaactatacttgcttatattaaaaaagacccagatgtaaatattacagaaaaagatatt
aaagcatacttgaaaaaatatatagctaattttaaaatacctaaatatgtatatttccca
aatgaacttccactaacaactattggtaaaattttaaaaagaaaattaaaagaaatggta
atgaaaggggaaatagaaggtataaagtaa
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