Mucispirillum schaedleri: N508_000419
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Entry
N508_000419 CDS
T08201
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
msch
Mucispirillum schaedleri
Brite
KEGG Orthology (KO) [BR:
msch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msch03016
]
N508_000419 (truB)
Enzymes [BR:
msch01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
N508_000419 (truB)
Transfer RNA biogenesis [BR:
msch03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
N508_000419 (truB)
Prokaryotic type
N508_000419 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
USF23361
UniProt:
V2QEM1
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All DBs
Position
complement(419632..420525)
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AA seq
297 aa
AA seq
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MNGIVSVYKESGMTSFDVVAKIRRLFNVSKCGHLGTLDPMAEGVLPILTGYATRFADYLS
SVDKEYIAEFKLGERSQSYDNTSEIEKVSDKIVSVEDLKNTFSSLTGKISLKVPAYSAKK
INGVRAYKLARKGEIEDAGQKEMEIYSIDLLNYEYPFGIMKVSCGKGTYIRSIINTIGER
LETGALMSGLIRSANGVFKSNKSYKISQLEQLSEENKLSQAVIPVYDVLEWGRVVIKDSF
IKHIKNGVSPNKDSFLFFPIEHKGSNFFIMDNKGNLLAAAERCESSDHPLKLNIVIN
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtattgtaagtgtatataaagaatctggtatgacatcttttgatgttgtagca
aaaatacgacgcctttttaatgtatcaaaatgcggtcatcttggaacacttgaccctatg
gcagaaggtgttcttcctattttaaccggatatgcaacaagatttgcagattatttatca
agtgtagataaagaatatattgcagaatttaaacttggggaaagaagtcaaagttatgat
aacacttcagaaatagaaaaagtttcagataaaattgttagtgtggaagatttaaaaaat
actttcagctctttaactggtaaaatatctttaaaagttccagcatattctgctaaaaaa
ataaatggtgttagagcttataagcttgcacggaaaggcgagatagaagatgctggtcaa
aaagaaatggaaatatattctattgaccttttaaactatgaatatccatttggtataatg
aaagtatcatgcggtaaaggcacatatataagaagtataataaatactattggcgagcgt
ttagaaactggtgcattgatgagtggtcttattcgttcagctaatggagtatttaaatct
aataaatcttataaaatttctcagcttgagcagctttctgaagaaaataaattatcacaa
gcagttattcctgtttatgatgtgttagaatggggcagagttgttattaaggacagcttt
attaaacacataaaaaatggtgtttctccaaataaagattcttttttattttttcctata
gagcataaaggcagtaatttttttataatggataataaagggaatttacttgcagctgca
gaaagatgtgaaagttcagaccatccattaaagttgaatattgtaataaattaa
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