Mucispirillum schaedleri: N508_000448
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Entry
N508_000448 CDS
T08201
Symbol
lcfB_3
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
msch
Mucispirillum schaedleri
Pathway
msch00061
Fatty acid biosynthesis
msch00071
Fatty acid degradation
msch01100
Metabolic pathways
msch01212
Fatty acid metabolism
msch02024
Quorum sensing
msch04146
Peroxisome
Module
msch_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
msch00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
N508_000448 (lcfB_3)
00071 Fatty acid degradation
N508_000448 (lcfB_3)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
N508_000448 (lcfB_3)
09145 Cellular community - prokaryotes
02024 Quorum sensing
N508_000448 (lcfB_3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
msch01004
]
N508_000448 (lcfB_3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msch04147
]
N508_000448 (lcfB_3)
Enzymes [BR:
msch01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
N508_000448 (lcfB_3)
Lipid biosynthesis proteins [BR:
msch01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
N508_000448 (lcfB_3)
Exosome [BR:
msch04147
]
Exosomal proteins
Exosomal proteins of breast milk
N508_000448 (lcfB_3)
Exosomal proteins of breast cancer cells
N508_000448 (lcfB_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
5-nucleotidase
VIT_2
Motif
Other DBs
NCBI-ProteinID:
USF23390
UniProt:
V2RJ20
LinkDB
All DBs
Position
458683..460224
Genome browser
AA seq
513 aa
AA seq
DB search
MLERNLYNMLYENTKKFPKRTFIYFEEKKYTYTEGFKIINQMAAFMQKKGVKKGDKVIIM
LGNSPEYVLSVFAVFACGAIAIPINTFFKGNEASYIVENSEALFMITEGQFEAVVEEVRV
QCKKLQEIFTFDNKIVNTLNFYEYIDNMPDAPIECKASVHDLALFIYTSGTTGHPKGAML
SHYNLLENATSCDKMINANHKDKFLILLPMFHTYTFTTCIIYPISVGSTLIILRSVMDMK
KDSFKKILIFQRPTIMLGVPQIYSVMAKSPMPKWFIKLLYPIKIHISGGAALPAEIFNQF
KKKFGINVIEGYGLSEASPVVALNPLNKQKQGTIGVTLPNIQAKIIGEDETELPRGQVGE
LIIKGPNVMQGYWHMPQATDDTIKNGWLFTGDFATMDEDGYISIIDRKKDLIIVKGMNVY
PREVEEVIYKYPGVDAVAVIGIPSIEQGEIIAAYIQAKENETIDEKDLRNYLAKHLANFK
LPRIINVIENIPLTATGKVLKRELKELVKNGKI
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagagaaatctttataatatgctttatgaaaacactaaaaaattcccaaaaaga
acttttatttattttgaagaaaaaaaatatacatatacagaagggtttaaaataataaat
caaatggcagcctttatgcagaaaaaaggcgtaaaaaaaggcgataaagttattattatg
cttggcaactctccagaatatgttttatctgtatttgcagtatttgcatgcggagcaatt
gctatacctataaacacattctttaaaggaaatgaagcatcatatattgttgaaaatagt
gaagcattatttatgattacagaaggacagtttgaagcagtagtagaagaagttcgtgtt
cagtgcaaaaaattacaagaaatatttacttttgataataaaattgttaatacccttaat
ttttatgagtatattgataatatgcctgatgcaccaattgaatgtaaagcatctgttcat
gatttagctttgtttatatatacatcaggcacaacaggacacccaaaaggtgctatgctt
tctcattataacctgctagaaaatgcaacaagctgtgataaaatgattaatgctaaccat
aaagataagtttttaatcctgctgccaatgttccatacttatacatttacaacatgtata
atttaccctataagtgtaggaagcacacttattattcttcgctcagtaatggatatgaaa
aaagacagcttcaagaaaatattaatttttcaaagaccaacaattatgcttggtgtgcct
caaatatattctgttatggcaaaatctcctatgccaaaatggtttattaaactgctatac
cctatcaaaatacatatatctggtggtgctgcactgcctgcagaaatatttaaccagttt
aagaaaaaatttggtattaatgttattgaaggttatggactttcagaagcatctcctgtt
gttgcactaaacccacttaataaacaaaaacaaggcacgattggtgtaacacttccaaat
attcaggcaaaaattataggagaagatgaaacagagctgccaagaggacaagttggcgaa
ttaattattaaaggtcctaatgttatgcagggatactggcatatgccacaggcaactgat
gatacaataaaaaatggctggctttttactggcgactttgccactatggatgaagatgga
tatatttcaatcatagacaggaaaaaagatttaatcatagttaaaggtatgaatgtttat
cctagggaagtggaagaagtaatttataaatatcctggagttgatgctgttgctgttatt
ggtatcccatctattgagcagggagagattattgccgcatatattcaggcaaaagaaaat
gaaactatagatgaaaaagatttaagaaattatctggcaaaacatttagccaactttaaa
cttcctcgtattattaatgttatagaaaatataccattaactgctacaggaaaagttctt
aaaagagagcttaaagagcttgttaaaaatggcaaaatttaa
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