Mucispirillum schaedleri: N508_001016
Help
Entry
N508_001016 CDS
T08201
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
msch
Mucispirillum schaedleri
Pathway
msch03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msch00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N508_001016 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msch03019
]
N508_001016 (rhlB)
Enzymes [BR:
msch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
N508_001016 (rhlB)
Messenger RNA biogenesis [BR:
msch03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N508_001016 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
USF23943
UniProt:
V2RMC4
LinkDB
All DBs
Position
complement(1075005..1076591)
Genome browser
AA seq
528 aa
AA seq
DB search
MSILERIKQIIKKNKTAQNQIIIKEISKKIAQKEINRENQAVIPENKHVEKRQNGRNIKS
KAKSRHSKSGELKNINIEDEIVEFGSWEISEFHVEEKEDILRFHDLGLSPRLMKGIYECE
YKYCTPIQQLILPESLKGKDVSGKAQTGTGKTAAFLITLFTRLMNNELSDRKKGTPRALI
MAPTRELVIQIEKDARNIGRYCGLTIQSVFGGINYEKQKRQIEQKFIDILVATPGRLLDY
KEQQVLDLSAVEILVIDEADRMLDMGFIPDMKKIISAAPPKSKRQTMLFSATLNQDILRL
ASQWTKDPVSFEVESKEITSENIEQIAYIASDKEKFAIIYNIVSQDMLNRVIIFGNRRDE
VARLTDMFKACGLSCGLLSGDVTQSRRIKTLEELRNGTIRILCATDVAARGIHVDGITHV
FNYSLPDDPEDYVHRIGRTGRAGEKGVSVIFATEEDSYLIPKIESYTKHKLNYINPEENL
VAVPNDLSKILKQFKSGRAGRKKTGSFREKRVKNRKEVSNRRPVKRKK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatactggaaagaattaaacaaattattaaaaaaaataagactgcacaaaatcaa
ataatcattaaagagatttcaaaaaaaatcgcacagaaagaaataaatagagaaaatcaa
gcagtaataccagaaaacaagcatgtagaaaaaaggcaaaatggtagaaatattaaaagc
aaagcaaaaagcaggcacagtaaaagtggtgagcttaaaaatattaacatagaagatgaa
atagtagaatttggcagctgggagataagcgaatttcatgtagaagaaaaagaagatata
ctccgctttcatgatttggggctttctccaagacttatgaaaggcatatatgaatgtgaa
tataaatactgcacaccaattcagcagcttattttgccagaaagtttaaaaggtaaagat
gtttcaggaaaagcccagacaggcacaggcaaaactgctgcatttttaattacattattt
acaaggcttatgaataatgaattaagtgacagaaaaaaaggcactccaagagcattaatt
atggcaccaacaagggagcttgttatacagatagaaaaagatgcaagaaatattggcaga
tactgcggcttaactatacagtctgtttttggcggtataaattatgaaaaacaaaaacgc
cagattgaacaaaaatttattgatattttagttgctactcccggcagacttcttgattac
aaagagcagcaggtgcttgatttaagtgcagtagagatacttgttattgatgaagctgat
agaatgcttgatatgggctttattcctgatatgaagaaaataattagtgcagcaccacct
aaatctaaaagacagacaatgctttttagtgctacattaaatcaggatattttaaggctt
gcttctcagtggacaaaagacccagtaagttttgaagtagaatcaaaggaaataacttct
gaaaatattgaacagattgcatatattgcatcagataaagaaaaatttgctataatatat
aatattgtttctcaggatatgttaaacagagtaataatttttggcaacaggcgggatgaa
gttgcaaggcttacagatatgtttaaagcatgcggtctttcctgtggtctgctttcaggt
gatgttactcagtcaagaagaattaaaacattagaagaacttagaaacggcacaatacgc
atattatgtgcaacagatgttgctgcccgcggaatacatgtagatggcattactcatgta
tttaattactcactgcctgatgatcctgaagattatgttcatagaataggcagaactggc
agagcaggggaaaagggagtgtcggttatttttgcaactgaagaagattcttaccttatt
cctaaaatagaatcatatacaaaacataagttaaattatataaacccagaagaaaatctt
gtggctgtgcctaatgatttaagtaaaatattaaaacagtttaaatcaggcagagcagga
agaaaaaaaaccggctctttcagagaaaaaagagtgaaaaacagaaaagaagtatcaaat
aggcgacctgttaaaagaaaaaagtag
DBGET
integrated database retrieval system
