Mucispirillum schaedleri: N508_001303
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Entry
N508_001303 CDS
T08201
Symbol
rnj
Name
(GenBank) Ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
msch
Mucispirillum schaedleri
Pathway
msch03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msch00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N508_001303 (rnj)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msch03019
]
N508_001303 (rnj)
Messenger RNA biogenesis [BR:
msch03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
N508_001303 (rnj)
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RMMBL
Lactamase_B
Lactamase_B_2
RNase_J_C
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
USF24220
UniProt:
V2RLF3
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All DBs
Position
complement(1369923..1371572)
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AA seq
549 aa
AA seq
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MKISVSSLGGVGEIGMNMYIYETDRYAVIVDCGVKFTKSDEIGVDLIIPDFSYIETIKYK
KIMLIITHAHEDHIGAVPYLIKEYPDIAVVCGRYSWDILNKRLDEHNISVNQIYIEDFKS
FEWGDFEITAYPISHSIHGTYAVMLKIAEEFKVVHISDYKIDSSPVTCTPFPLKEFISFG
KDGIDLLMADSTNVIKNGFTKGEYQVTKGIEEVFKKASGRIFFTTFASNTERLQTVFNAA
EKYGRKVALEGSSMIKHVDTARKHGRLSFNDDILISRKQVEKLDDNKICFIATGSQGEGV
SVITKIAENDYSNIKVRKNDTFIFSSRIIPGNEHRLIYIMNNVYAKGGSVITADDLPIHV
SGHAAKEDALLLLKILKPKYLVPIHGEVQHLVKHKKLAADYGMHDENIIFFLSGNKIIFE
NGSFKEMQEIPAGKRYVDLNTEEFLTSDGLKERKKLAINGAVVVVNSAENVENIKEDDII
IQLIGFSIEKEYINILKQSIIEYSQIEESGINQKIEFSEYTEQTVKRFFKKRFNRRPFIS
IINTHNGAV
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatatctgtttccagccttggcggtgtcggagagataggaatgaatatgtatatc
tatgaaacagatagatatgcagtaattgttgattgcggtgttaaatttactaaaagcgat
gaaataggtgttgaccttattattccagacttttcctatatagaaaccataaaatataaa
aaaataatgctgataataactcatgctcatgaagaccatatcggtgcagtgccttattta
ataaaagaatatccagatattgcagtagtctgcggcagatattcttgggatatacttaat
aaaaggcttgatgaacataatatatcagttaatcaaatatatatagaagactttaagtct
tttgaatggggtgattttgaaattacagcatatcccataagccattcaatacatggcact
tatgcagttatgcttaaaattgcagaagaatttaaagtggtgcatatatcagattataaa
atagattcatcccctgttacatgcacaccttttccattaaaagagtttataagttttgga
aaagatggcatagatttgctgatggcagattctaccaatgttataaaaaacggctttact
aagggggagtatcaggtaacaaaaggcatagaagaagtatttaaaaaagcttctgggcgg
atattttttactacttttgcatctaatacagaaagattgcagacagtatttaatgcggca
gaaaaatatggcagaaaggttgcacttgaaggctcttcaatgataaaacatgtagataca
gcaagaaaacacggcaggctttcttttaatgatgatatactaatatcaagaaaacaggta
gaaaaacttgatgataataaaatatgctttatagcaacaggctctcagggtgaaggggta
agtgtaataacaaaaatagcagaaaatgattactcaaatataaaagtaagaaaaaacgat
acttttatattttcatcaagaataattccgggaaacgaacacagacttatttatattatg
aataatgtatatgcaaaaggaggctcagtaataacagcagatgatttgcctatacatgtt
tcaggtcatgcggcaaaagaagatgctctgcttttattaaaaattttaaagccaaaatat
ttagtgccaatccatggggaagtgcagcatcttgtaaagcataaaaaacttgcagcagat
tatggaatgcatgatgaaaatattattttctttttatcaggtaataagataatctttgaa
aatggcagttttaaggaaatgcaggaaataccagcaggcaaaagatatgttgatttaaat
acagaagagtttttaacttctgatggattaaaggaaagaaaaaaacttgcaattaatggg
gcagttgtggtagttaatagtgcagaaaatgtagaaaatattaaagaagatgatataatt
atacagctaattggattttctattgaaaaagaatatataaatatattaaaacaatcaatt
atagaatacagtcaaatagaagaaagtggaataaatcagaaaatagaattcagcgaatat
acagaacagactgttaaaagattttttaaaaagcgattcaacaggcggccgtttataagc
ataataaatacacataatggagcagtataa
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