Mucispirillum schaedleri: N508_001503
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Entry
N508_001503 CDS
T08201
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
msch
Mucispirillum schaedleri
Pathway
msch03030
DNA replication
msch03430
Mismatch repair
msch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N508_001503 (dnaE)
03430 Mismatch repair
N508_001503 (dnaE)
03440 Homologous recombination
N508_001503 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msch03032
]
N508_001503 (dnaE)
03400 DNA repair and recombination proteins [BR:
msch03400
]
N508_001503 (dnaE)
Enzymes [BR:
msch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N508_001503 (dnaE)
DNA replication proteins [BR:
msch03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
N508_001503 (dnaE)
DNA repair and recombination proteins [BR:
msch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
N508_001503 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
USF24417
UniProt:
V2RKS7
LinkDB
All DBs
Position
1575770..1579507
Genome browser
AA seq
1245 aa
AA seq
DB search
MTQLQEKECLKGRFVHLHLHTLYSALDGAIKIKKLAEKLKANGMEACAITDHGVMYGIID
FYNTMKKEGIKPIIGSEFYISPDSRFNKKDHYKQGDDTNYHLVLLAENNDGLQNLYKLST
IGFLEGFYRKPRIDKETLRQYSKGVIALSACLGGEISRKFLKEGYEAARNAALEYDEILG
RNNYFLEIQENGIPEQKIVNNQLIQISKETGIPLVATCDSHYLNKEDYSSHNILMQIQLG
QVGDEKRKPRLKPVDASQQIKTDTTSQMKGDINGYLAREDDLDDLSRDTSDTLDPAIMHS
RSGKMDYSSMLYVKTPDEMYNDFSYCTEAVENTVKIAERCNISITFGINHLPQYEVPEGY
TLESYFRELSAKGLKERLKKVPEEQHHIYWERLNYELEIIIMKGFDAYFLIVWDFINYSR
QNHIPVGPGRGSGAGSLVAYSLTITDIDPIRFKLFFERFLNPERVSMPDFDIDFCIKGRD
DVIKYVSQKYGEEKVSQIVTFGTLKPKNAVRDVCRVYNTPLVEVNKLAKSIPDGPSITTF
QKAYDADPELYSRFENIEHGAEIRKHSENLEGSIRQVGMHAAGVVIADKPLVEYAPLAKG
PKGEVILQFEKGAAEAVGLIKFDFLGLKNLTIIDEAVKRIHATVDKDFDVDHLPLNDKEI
YEMLQHGDTSGVFQLESAGMKSLLKRLRPTVFEDIIAANALYRPGPIESGMLDSFIKRKH
GEEEVIYPFEEIKDILEETYGVIVYQEQVMQIAQVLGGYSLGAADMLRRAMGKKKKEEME
KNRAIFLYGDEEKNIPGVQKLGKDVQKASDLYDLIDKFAGYGFNKSHSAAYAYIAYQTAY
LKVKYPKEYMSALLSVSIDNIDDVVKYIDECSRMGIKILPPDINKSYFDFRVEGDAVRFG
LGAIKSVGQAAIESFIIEREKNGKYKSIYDLCDRMDFKSAANKKTIEAFIYSGTLDCFGK
SRHQHTCVYMSALEAAASKAKDREKGFGSIEDFLTGEREEYYPNVEEPPAKVLLLKEKEI
LGFYYSSHPLKEYNKYIETFAEDMELVNSMRSEGEVLVAGMIKSIRHHITKSKKEKMAFL
ELEDTKNSVDVVVFPKMYADNIMHLNEDNIIAVQGMFTPNNEDGTGSITARKIMTLGHAL
EENTATLKITIDTEKSTPDRVFQIKTLIARFKGRLPVNIIFILPNKYRVSMSVSEEYEVC
PEIEFLELLKQVPGVIDIEFVQTGDITYSLDLETENYTMDTWSIA
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgacacaattacaagaaaaagaatgcttaaaaggcaggtttgttcatcttcatctgcat
actttatattctgcccttgatggtgcaattaaaataaaaaaactggcagaaaagttaaaa
gcaaacggaatggaggcctgtgctattactgaccatggcgtaatgtatggtataatagat
ttttataatactatgaaaaaagagggtataaagcctattattggcagtgagttttatatt
tctccagacagccgttttaataaaaaagaccattataaacaaggtgatgatactaactat
catttagtattacttgctgaaaataatgatggtctgcaaaatctttacaagctttctacc
atagggtttttagaaggattttacagaaaaccgcgtatagataaggaaacattaaggcag
tattcaaaaggagtaatagctctttctgcatgtttaggtggagaaatatctcgtaagttt
ttaaaagaaggttatgaagcagcccgtaatgctgcccttgaatatgatgaaatacttggc
agaaataattattttttagagatacaggaaaatggtatcccagaacagaaaatagtaaat
aatcagcttatccaaatatcaaaggaaacaggtataccacttgttgctacatgtgacagc
cattatttaaataaggaagattattcatcacataatatattaatgcagattcaattaggg
caggtaggcgatgaaaaacgcaagcctagattaaagcctgtggatgcttctcagcagata
aaaacagatactacttcacaaatgaaaggggatattaacggttatcttgccagagaagat
gacttagatgatttaagcagagatacttctgatacattagaccctgcaataatgcactcc
cgcagcggcaaaatggattattccagtatgctttatgtaaaaactccagatgaaatgtat
aatgatttcagctactgcactgaagctgttgaaaacactgttaagatagcagaaagatgt
aatataagcataacttttggcataaaccacctgccacagtatgaagtgccagaaggttat
acactagaatcatattttagagagctttcagcaaaagggcttaaagagcgtcttaaaaaa
gtgcctgaagaacagcatcatatatactgggaaaggcttaattatgaacttgaaatcatt
attatgaaaggctttgatgcatactttttaatagtgtgggattttattaactattcaaga
caaaatcatattccagtaggtccaggcaggggctctggtgcaggctctcttgttgcttac
tccctgactattacagatattgaccctatcaggtttaaacttttctttgaaaggttttta
aacccagagcgtgtcagtatgccagactttgatatagatttctgcataaaaggcagagat
gatgttataaaatatgtaagccagaaatatggagaagaaaaagtatctcaaatagtaaca
tttggcacattaaagccaaaaaatgctgtccgagatgtatgcagggtatataatactcca
cttgtagaagtgaataaacttgcaaaatctattcctgatggtccaagtatcactacattc
caaaaggcctatgatgcagaccctgaattatacagcaggtttgaaaatatagagcatggg
gcagaaatccgcaaacacagtgaaaatttagaaggctctatccgtcaggttggtatgcat
gctgccggtgttgtaatagcagataaaccacttgtagaatatgcaccacttgcaaaaggt
ccaaagggcgaggttattctacagtttgaaaaaggtgcggcagaagctgttgggcttatt
aagtttgactttttaggtcttaaaaacttaacaattattgatgaagcagtaaaaaggata
catgccacagtagataaagattttgatgtagaccatcttccacttaatgataaagaaata
tatgagatgcttcagcatggagatacatctggagtattccagctggaaagtgccggtatg
aaatcactgcttaaaagattaagacctacagtgtttgaagatattattgcagctaacgct
ttataccgtccgggacctattgaaagcggcatgcttgacagttttataaaaagaaaacac
ggagaagaagaagtaatatatccttttgaagaaatcaaagatatattagaagaaacttat
ggtgtcatagtttatcaagagcaggtgatgcagatagctcaggttttaggcggctactct
cttggtgctgctgatatgctaaggcgtgctatgggtaagaaaaagaaagaagaaatggaa
aaaaacagagccatattcttatatggtgatgaagaaaaaaatattccgggtgtgcaaaag
ttaggaaaagatgtgcagaaagcatcagatttatatgatttgatagataaatttgcaggc
tatgggtttaataaatcacactctgctgcttatgcttatattgcataccagacggcttat
ttaaaagtgaaatatccaaaagaatatatgagtgcattgttatctgtttctattgataat
attgatgatgtagtaaaatatatagatgaatgttccagaatgggtataaaaatactgccg
ccagatattaataaaagttactttgattttagagtggagggcgatgctgtccgctttggt
cttggagctataaaaagtgtaggtcaggctgctattgaatcatttatcatagagcgtgaa
aaaaatggcaaatataaaagtatatatgatttatgcgacagaatggactttaaatcagct
gccaacaaaaaaacaatagaagcatttatttattcaggcacacttgactgttttggaaaa
tcaaggcatcagcatacatgtgtatatatgtctgctcttgaagctgcagcaagcaaagca
aaggacagagaaaaaggctttggctcaatagaagatttcttaactggtgaacgagaagaa
tattatccaaatgtggaagaaccgcctgcaaaagtgctgcttttaaaggaaaaagaaata
ctaggcttttactattcaagccatccattaaaggaatataataaatatatagaaactttt
gcagaagatatggagcttgtaaacagtatgcgaagtgaaggtgaagttttagttgcaggt
atgattaaaagcatacgccatcatattacaaaaagtaaaaaggaaaaaatggctttttta
gagctggaagatacaaaaaatagtgtagatgtagtagtttttccaaaaatgtatgcagat
aatatcatgcacttaaatgaagataatataatagctgttcagggaatgtttactccaaat
aatgaagatggcacaggctctattactgctagaaaaattatgacattagggcatgcatta
gaagaaaatactgccacactaaaaatcacaatagatactgaaaaatcaacacctgacaga
gtgtttcaaataaaaactctgattgcacggtttaaaggcagactgcctgtaaatataata
ttcattttgccaaataaatacagggtatcaatgagtgtatcagaagaatatgaagtatgc
cctgaaatagaatttttagagcttttaaaacaggtgccgggtgttatagatattgagttt
gtgcagacaggtgacatcacatattcattagatttagaaacagaaaattatacaatggat
acatggagtatagcataa
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