Myxococcus stipitatus: MYSTI_00276
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Entry
MYSTI_00276 CDS
T02436
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
msd
Myxococcus stipitatus
Brite
KEGG Orthology (KO) [BR:
msd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msd03016
]
MYSTI_00276
Enzymes [BR:
msd01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
MYSTI_00276
Transfer RNA biogenesis [BR:
msd03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
MYSTI_00276
Prokaryotic type
tRNA splicing ligases
MYSTI_00276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AGC41635
UniProt:
L7U189
LinkDB
All DBs
Position
350820..351977
Genome browser
AA seq
385 aa
AA seq
DB search
MSPRLLPAEPGAVPILVWARRSPPGAEQQLRHLAAQPYVVEHVAAMPDLHVSEGIAVGTV
FATEHHVVPGALGGDLGCGVSAYRFESPAASLGPDVLRELLERLAQVIPVGDATHRGRGL
ALPPELEAPPLSTQKLRHAWERLAPRHLGTLGGGNHFLELDRDAVGDLWLLVHSGSRGVG
AAISDHHQRVARALGEGSLPGLRLDTPEGAACLADLELACRFARANRDTLAARALSVLAP
TLEVAPDAASTVDVHHNHVSREWHFGRPLWVHRKGAMGLEAGARGLIPGSMGTASYVVEG
RAEPRAFHSCSHGAGRVLTRREARARIRPAALAQALRRVVHDSGRAAALVEEAPAAYRDI
VEVLEDEADLVTPVRRLTPMAVLKG
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgagtcctcgactcctccccgcggagccgggcgccgtgcccatcctcgtctgggcgcga
aggtctcctcctggcgcggagcagcagctccggcacctcgccgcgcagccgtatgtcgtc
gagcacgtggccgcgatgccggacctccacgtctccgagggcatcgcggtgggcaccgtc
ttcgccaccgagcaccatgtcgtgcccggcgcgctgggcggggacctgggctgcggcgtg
agcgcgtaccgcttcgagtcccccgccgcctcgctgggccccgacgtgctgcgcgagctg
ctcgagcggctggcccaggtcatccccgtgggtgacgccacgcaccgaggccgggggctc
gcgcttcctcccgagctggaggccccgccgctgtccacccagaagctgcgccacgcgtgg
gagcggctcgcgccgcgacacctgggcacgctgggcggaggcaaccacttcctcgagctg
gaccgggacgcggtgggagacctctggctgctcgtgcactccggctcgcgcggcgtgggc
gcggccatctccgaccatcatcagcgcgtggctcgggcgctgggggagggcagcctgccc
ggtctccggctggacactccggagggggccgcctgcctcgcggacctggagctcgcctgt
cgcttcgcccgcgccaaccgcgacacgctggcggccagggccttgtccgtcctcgctccg
acactggaggtggcgcccgacgcggcgtcgaccgtggatgtccaccacaaccacgtgtcc
agggagtggcacttcggccggccgctctgggtgcatcgcaagggggccatgggcctggag
gcgggagcccgaggactcatcccaggctccatgggcaccgcctcctatgtggtggagggc
cgggcggagcctcgcgccttccactcctgctcccacggcgccggccgcgtcctcacccgg
cgggaggcccgcgcacgcatccgccccgccgcgctggcccaggcgctgcgtcgcgtggtg
cacgactccgggcgcgcggcggccctcgtggaggaggcccccgccgcctaccgcgacatc
gtggaggtgctcgaggacgaggcggacctcgtcacccctgtacggcggctgacacccatg
gccgtcctcaagggctga
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