Myxococcus stipitatus: MYSTI_01686
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Entry
MYSTI_01686 CDS
T02436
Name
(GenBank) sigma-54 dependent transcription regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
msd
Myxococcus stipitatus
Brite
KEGG Orthology (KO) [BR:
msd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msd03000
]
MYSTI_01686
Transcription factors [BR:
msd03000
]
Prokaryotic type
Helix-turn-helix
Other families
MYSTI_01686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF_3
GAF_2
GAF
AAA_5
HTH_8
AAA_16
AAA_19
AAA_22
Mg_chelatase
nSTAND3
AAA_30
AAA
MCM
TIP49
Motif
Other DBs
NCBI-ProteinID:
AGC43018
UniProt:
L7U4E2
LinkDB
All DBs
Position
2075208..2076818
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AA seq
536 aa
AA seq
DB search
MSDELSGLTEGAKDARDLVELATTEDSVEELLRRGLDWLTRVVRFDLATLFLLRDGKLVS
VAARGPLANAKVRHHALALSEFPSLKQALETRRARAFTEEDHSHGDGDPFDGVLDLPAGH
ACMVVPLCAGERTYGVLTLDRAECETYPQPVVDLVEVYGQMLATALQAAEQRAAFEQLHR
QDHEHAKLLEAQLGGDSEGILETSLSPVMRDLARRARQVAETDTPVLITGETGTGKERLA
RAIHRWSSRADQPFVTLNCAAIPAGLLESELFGHVKGAFTGATKDRAGRFQMAHGGTLLL
DEVGELPVELQAKLLRALQEKAFEPVGSDKTVRSDVRILAATHVDLQKAIAEKRFREDLY
YRLSVFPLRLPPLRERREDLPQLCTFLLEEQAKRTGRRGMRVSPAGLGRLAAYEWPGNLR
ELANALERATILTPGTELGATAFDVGTSSGGAPVPAQASSPVEAAAPDAAMKPGAVLTLA
AVQREHILRVLSLTRGRVYGPGGAAALLGLKPSTLQSRMKKLGIARLEQFVVDEAS
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgaactgtctggccttaccgagggcgcgaaggatgctcgggacctggtcgag
ctggcaaccaccgaggattcggtggaggagctgcttcgtcgaggactggactggttgacg
cgcgtggtgcgcttcgacctggcgacgctgttcctcttgagggacggcaagctggtgtcg
gtggcggcgcgtgggccgctcgcgaacgcgaaggtgcgtcaccacgcgctggcgctctcg
gagttcccttccttgaagcaggcgctggagacgcggcgcgcacgggccttcacggaggag
gaccactcgcacggcgacggagacccgttcgatggcgtgctggacctgccggcggggcac
gcgtgcatggtggtgccgctgtgcgcgggcgagcgcacgtacggcgtgctgacgttggac
cgggcggagtgcgagacgtatccgcagcccgtcgtggacctggtggaggtgtacgggcag
atgctcgcgacggccctccaggcggccgagcagcgcgccgccttcgagcagctccaccgc
caggaccacgagcacgcgaagctgctggaggcgcagctcggcggagactcggagggcatc
ctcgagacgtcgctgagtccggtgatgagggatctggcgcggcgcgcgcggcaggtggcg
gagacggacacgccggtgttgatcacgggcgagacgggcacgggcaaggagcgcctggcg
cgggccatccaccgctggagctcgagggcggaccagcccttcgtcacgctcaactgcgcg
gcgattccggcggggctcctggagagcgagctgttcggccacgtgaagggcgccttcacc
ggcgcgacgaaggaccgcgcgggccgcttccagatggcccacggtggcacgctgctgctc
gacgaggtgggcgagctgcccgtcgagcttcaggccaagctcctgcgcgcgctgcaggag
aaggcgttcgagccggtgggcagcgacaagacggtgcgctcggacgtgcgcatcctcgcg
gcgacgcatgtcgacttgcagaaggccatcgcggagaagcgcttccgcgaggacctctac
taccggctgagtgtcttcccgctgcggctgccgcccttgcgcgagcggcgcgaggacctg
ccccagctgtgtacgttcctcctggaggagcaggcgaagcgcacgggccggcgcgggatg
cgcgtgtcacccgcggggctgggccggctggccgcgtacgagtggccgggcaacctgcgc
gagctggcgaacgcgctggagcgcgccaccatcctgaccccgggcacggagctgggagcc
acggccttcgacgtgggcacttcgtctggaggtgccccggtccccgcgcaagcctcttcc
ccggtagaggccgcggcgccggacgcggcgatgaagcccggcgcggtgctgacgctggcg
gcggtgcagcgcgagcacatcctgcgggtgctctcgctcacgcggggccgcgtctacggg
ccgggtggggcggcggcgctgctcggcctcaagccctccacgctccagagccggatgaag
aagctgggcatcgcccggctggagcagttcgtggtggacgaggcgtcctga
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