Myxococcus stipitatus: MYSTI_02242
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Entry
MYSTI_02242 CDS
T02436
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
msd
Myxococcus stipitatus
Pathway
msd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYSTI_02242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msd03019
]
MYSTI_02242
03400 DNA repair and recombination proteins [BR:
msd03400
]
MYSTI_02242
Enzymes [BR:
msd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MYSTI_02242
Messenger RNA biogenesis [BR:
msd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MYSTI_02242
DNA repair and recombination proteins [BR:
msd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MYSTI_02242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
DUF4423
DprA_WH
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AGC43564
UniProt:
L7UAT4
LinkDB
All DBs
Position
complement(2839974..2842055)
Genome browser
AA seq
693 aa
AA seq
DB search
MRAMPLALPYFEQAQQGLVRHFGLAQFRPGQAEVISTVLSGRNTVVVMPTGAGKSLCYQL
PATLLPGVTLVVSPLIALMKDQVEQLTARGISATFINSSLSDLERAERMRRLRAGEYKLL
YVAPERFRSASFCQTISDVGVDLFAVDEAHCISQWGHDFRPDYALLGQVRKRLRPPRTVA
LTATATPEVRADIVRVLLMKEPREFAMGFDRPNLFLGKQEVGGDSDRHEACARLAALGGS
GIIYCSTRRASEGVFSELHGRGVKAVLYHAGMDDDARRRAQDTFMSAKDAVAVATNAFGM
GIDKSDIRFVAHANIPRAVEAYYQEIGRAGRDGGDARAVLLFNHADVYTQERLIQGNHPS
EAVLADVWGVLQSVEEFERGVHVLAGMVNASEFEVSAAVRIFERAGKLERGNRGEGAHGV
TLTEKAQGAHPHAADAQRLLKSLLETFPVGRQSTTELTILARRVGLTVDEVRHALGLLEK
SGVVKVRRPFSGRSIRALVRLPFREMGMDLSHVREQERQNLQLLRRMTDYAYADREQRCR
RRSVLHYFGQQDVEDACGNCDVCAPAKMPVLLSGGPSASRARTAAAAAPVTSYSELASTE
LRRWRKELSKDLGVAPFIIFNDATLLGLAATLPIDREGFLTVKGTGESRWERFGPKVVEI
CLMARAAGHEPQVVPMAMSKARKPRIRRAGASD
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcgatgccgttggccctgccctatttcgagcaagctcagcagggcctggtgcgc
catttcggtctggcacaattccgtccgggccaggccgaggtcatctccaccgtcctgagc
gggcgcaacaccgtggtggtgatgcccacgggcgcgggcaagagcctgtgctaccagctt
ccggccacgctgctgccgggggtgacgttggtggtgtccccgctgattgcgctgatgaag
gaccaggtggagcagctcacggcgcggggcatctccgcgacgttcatcaactcgtccttg
tcggacctggagcgcgcggagcggatgcgccggctgcgcgcgggtgagtacaagctgctg
tacgtggcgcccgagcgcttccggagcgcgagcttctgccagacgatttccgacgtgggc
gtggacctgttcgcggtggacgaggcgcactgcatctcgcagtggggccacgacttccgg
ccggactacgcgctgctggggcaggtgcgcaagcggctgcgcccaccgcgcacggtggcg
ctcaccgcgacggccacgcccgaggtccgcgcggacatcgtccgggtgctgctgatgaag
gagccccgggagttcgccatggggttcgaccggcccaacctcttcctcggcaagcaggag
gtgggcggggactcggaccggcacgaggcctgcgcgcggttggcggcgctgggcggcagc
ggcatcatctactgctcgacgcggcgcgcgtcggagggtgtcttctcggagctgcacggc
cgaggcgtgaaggcggtgctgtaccacgcgggcatggacgacgacgcgaggcggcgggcg
caagacacgttcatgtccgcgaaggacgcggtggcggtggccaccaatgcgttcggcatg
ggcatcgacaagtcggacatccgcttcgtcgcccatgccaacatcccccgggcggtggag
gcctactaccaggagattggtcgcgcgggccgcgacggaggggatgcgcgagcggtgctg
ctgttcaaccacgcggatgtctacacacaggagcggctcatccagggcaaccacccgtcg
gaggcggtcctcgcggacgtgtggggcgtgctccagtcggtggaggagttcgagcgaggc
gtccacgtgctcgcgggcatggtgaacgccagcgagttcgaggtctccgccgcggtgcgc
atcttcgagcgcgcggggaagctggagcgaggcaaccgcggcgagggggcgcacggggtg
acgttgacggagaaggcccagggagcgcacccgcatgcggcggacgcgcagcggctcctg
aagtcgctcttggagaccttccccgtggggcggcagtccaccaccgagctgaccatcctc
gcccggcgcgtcgggctgacggtggacgaggtgcggcacgcgctgggcctcttggagaag
tcgggcgtggtgaaggtgcgcaggcccttctccggacgctccatccgcgcgctggtccgc
ctccccttccgggagatgggcatggacctgagccacgtgcgcgagcaggagcggcagaac
ctccagctcctgcggcggatgacggactacgcctacgcggaccgggagcagcgctgccgg
cggaggagcgtcctgcactacttcgggcagcaggacgtggaggacgcgtgcggcaactgc
gatgtctgcgcgcccgcgaagatgccggtgctgctgtccggtggcccctccgcgtcgcga
gcgcggacggccgccgctgccgccccggtgacgagctacagcgagctggcctcgacggag
ctgcggcgctggcgcaaggagctgtcgaaggacctgggggtcgcccccttcatcatcttc
aacgacgcgacgctgttgggactcgccgcgacgctgcccatcgaccgggagggcttcctc
acggtgaagggcacgggcgagagccgctgggagcgcttcggccccaaagtggtggaaatc
tgtctcatggcccgggccgcggggcatgagccccaggtcgtccccatggccatgagcaag
gctcgcaagccccgcatccgccgcgcgggcgcctccgactga
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