Myxococcus stipitatus: MYSTI_02368
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Entry
MYSTI_02368 CDS
T02436
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
msd
Myxococcus stipitatus
Pathway
msd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYSTI_02368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msd03019
]
MYSTI_02368
03016 Transfer RNA biogenesis [BR:
msd03016
]
MYSTI_02368
Enzymes [BR:
msd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MYSTI_02368
Messenger RNA biogenesis [BR:
msd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MYSTI_02368
Transfer RNA biogenesis [BR:
msd03016
]
Prokaryotic type
tRNA degradation factors
MYSTI_02368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
DUF3500
Motif
Other DBs
NCBI-ProteinID:
AGC43684
UniProt:
L7UB45
LinkDB
All DBs
Position
2965371..2967539
Genome browser
AA seq
722 aa
AA seq
DB search
MLKKSVKIGESELSIEVGRMAKQADGSVVVRYGDTMLLVTAVSAREKKDVDFLPLTVEYQ
EKLYSAGRIPGSYFKREGRLTEKETLASRLVDRSARPLFPEGYAYETQIIASVISADPEN
EGDVHGITGASAALWVSDIPFNGPIAGIRVGRVGGQLVANPTAKQREQSDLDLVMAVSRE
AIVMVEGGAEEVSEADMVAALEFGFKSAQPALDLQDELRRELNKQVRAFDKAPAVDEALR
AKVRDLAMAGIKAGYEIKEKGARYDALSKAKKETIVKLKEQMGETFTSQVEKHAKQVVED
LKYEHMREMTVNGGRIGGRGHDVVRAITCEVGVLPRTHGSALFTRGETQALVVTTLGTSE
DEQRLEMLGGMTFKRFMLHYNFPPFSVNETKPLRGPGRREIGHGALAERALRNMVPKSDS
FPYTVRLVSDILESNGSSSMASVCGGTLALMDAGVPIKSPVAGIAMGLVKEGDKVAILSD
ILGDEDHLGDMDFKVCGTTKGITSIQMDIKITGLTTEIMSRALEQARQGRIHILGEMLKS
LAQPRKEISQYAPRITTIQIRPEFIKNVIGPGGKVIKDIIARTGAAINIEDSGRVDIASA
NGEAVKAAIAMIQALTREAEIGKIYTGTVRKIAEFGAFVELFPGTDGLIHISELSDKRVK
SVSDVLKEGDEVLVKVVSIDKTGKIRLSRKEAMAERAAQQQGAADTVAAQPAPEATQPNA
KA
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagaagagcgtcaagattggtgagagcgagctgagcatcgaagtgggccgcatg
gccaagcaggccgacggctccgtggtggttcgctatggcgacaccatgctgctggtgacc
gcggtcagcgcgcgcgagaagaaggacgtcgacttcctgccgctgacggtggagtaccag
gagaagctgtactcggccggccgcatccccggcagctacttcaagcgcgagggtcgcctc
acggagaaggagacgctggccagccgcctggtggaccgctccgcgcgtccgctgttcccg
gaaggctacgcgtacgagacgcagatcatcgccagcgtcatctccgcggacccggagaac
gagggcgacgtgcacggcatcaccggcgcctccgcggcgctgtgggtgtcggacatcccg
ttcaacggccccatcgccggcatccgcgtgggacgcgtgggtggtcagctggtggcgaac
cccaccgcgaagcagcgtgagcagagtgacctggacctggtcatggcggtcagccgcgag
gccatcgtcatggtcgagggcggcgccgaagaggtgtccgaggcggacatggtggccgcg
ctggagttcggcttcaagtccgcgcagcccgcgctggacctgcaggacgagctgcgccgc
gagctgaacaagcaggtgcgcgcgttcgacaaggcgcccgcggtggacgaggcgctgcgc
gccaaggtccgcgacctggcgatggcgggcatcaaggccggctatgaaatcaaggagaag
ggcgcccgctacgacgcgctctccaaggcgaagaaggagaccatcgtcaagctcaaggag
cagatgggcgagaccttcacgtcgcaggtggagaagcacgccaagcaggtggtggaggac
ctgaagtacgagcacatgcgcgagatgacggtcaacggtggccgcatcggtgggcgtggg
cacgacgtggtccgcgccatcacgtgtgaagtcggcgtgctgccgcgcacgcacggaagc
gcgctgttcacccgtggcgagacgcaggccctggtcgtcaccacgctgggcaccagcgag
gacgagcagcgcctggagatgctgggtggcatgacgttcaagcgcttcatgctgcactac
aacttccccccgttcagcgtgaacgagaccaagccgctgcgtggcccgggccgccgtgaa
atcggccacggtgcgctggcggagcgcgcgctgcgcaacatggtgccgaagagcgactcg
ttcccgtacacggtgcgcctcgtgtcggacatcctggagtccaacggctcctcctccatg
gcctctgtgtgcggtggcacgctggcgctgatggacgcgggtgtccccatcaagtcgccg
gtggcgggtatcgccatgggtctggtgaaggagggcgacaaggtcgccatcctgtcggac
atcctcggtgacgaggaccacctgggcgacatggacttcaaggtgtgcggcaccacgaag
ggcatcacgtccatccagatggacatcaagatcaccggcctcaccacggagatcatgagc
cgcgcgctggagcaggcgcgtcagggccgcatccacatcctgggcgagatgctcaagtcg
ctggcgcagccccgcaaggagatcagccagtacgctccgcgcatcaccaccatccagatt
cgtcccgagttcatcaagaacgtcatcgggccgggcggcaaggtcatcaaggacatcatc
gcgcgcaccggcgcggcgattaacatcgaggactccggccgggtggacatcgccagcgcg
aacggcgaggccgtgaaggccgccatcgcgatgatccaggcgctgacccgcgaggcggag
atcgggaagatctacacgggcaccgtgcggaagatcgccgagttcggcgccttcgtggag
ctgttcccgggcaccgacggcctcatccacatctccgagctgtccgacaagcgcgtcaag
agcgtctccgacgtgctgaaggagggcgatgaggtgctggtgaaggtggtcagcatcgac
aagacgggcaagattcgtctgtcgcgcaaggaggcgatggcggagcgcgcggcgcagcag
cagggcgcggcggacaccgtcgcggcgcagccggcccccgaggccacccagcccaacgcc
aaggcctga
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