Myxococcus stipitatus: MYSTI_02998
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Entry
MYSTI_02998 CDS
T02436
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
msd
Myxococcus stipitatus
Pathway
msd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
msd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MYSTI_02998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msd03400
]
MYSTI_02998
DNA repair and recombination proteins [BR:
msd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MYSTI_02998
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MYSTI_02998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
RsgA_GTPase
AAA_29
AAA_16
nSTAND1
AAA_21
AAA_25
Viral_helicase1
AAA_22
DnaJ_CXXCXGXG
cobW
MMR_HSR1
Zn_ribbon_3
MurT_C
Zn_Tnp_IS91
Motif
Other DBs
NCBI-ProteinID:
AGC44314
UniProt:
L7UCX4
LinkDB
All DBs
Position
complement(3796630..3799530)
Genome browser
AA seq
966 aa
AA seq
DB search
MSEPDVISLRGAKEHNLKNVSLDIPKKKLVVFTGVSGSGKSSLAFDTLYAEGQRRYVESL
SAYARQFLGQMEKPKYDTIRGLSPTISIEQKAASNNPRSTVGTVTEVHDYLRVLYASIGV
QHCPNCGRKVGKQSAQQIVDEILKMPAGSKVQVLAPLVSNRKGEHKDLLTEAQKRGFSRA
RIDGKLKSLEERVELDKKTKHDIELVIDRLVLKADIKTRLTDSVETALREGKGTLIITDE
TGAATADRVMSELNACPSCGVSFGDLTPASFSFNNPLGMCTDCNGLGTRPEMDPDLIVPD
TSRSIRDGAIEPWASGMNRGEGWTADFVESLAKAFKIDLDVPYAKLSKRERDTLMNGANG
KSFNIQWGEGGNYKVEWEGLVERLMRNFKTTTSEARRTELQKYFSDKPCPTCKGERLRPE
SRAVKVHGHSIVALSRLTIADALAFLGAMALSEHERKIATELLKEIRSRLSFLVDVGLGY
LMLDRTASTLSGGESQRIRLASQMGSELTGVIYILDEPSIGLHQRDNGKLLTTLKRLRDL
GNSVIVVEHDEETMEEADWLVDFGPGAGELGGQVVSQGTPKQVMADENSVTGGYLSGRLE
IEIPEQRRAPNPKHQLVIQGAKENNLRDVDAVIPLGIFTAVTGVSGAGKSTLINEILFPA
LARHLYESREAPGKHKAVLGVEHLDKVIDIDQRPIGRTPRSNPATYTKLFDTIRDVFALT
PEARAFGYGPGRFSFNVKGGRCEACEGDGVKLVEMHFLADVYVPCEVCGGKRFNEATLRV
RYKGKNIAETLDMSVREAMEHFSAHKDIMRVLQTLSDVGLGYIRLGQPSPTLSGGEAQRI
KLARELARVATGRTLYILDEPTTGLHFEDIRKLLSVLNRLVAAGNSVLVIEHNLDVIKSA
DWLIDMGPEGGAGGGQVMAVGTPESVAKVVGSHTGRYLAHVLGKSRRARVGKRVDGPAPL
ANGALR
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagcccgacgtcatttccctccgaggcgccaaggagcacaacctcaagaacgtc
tccctggacatccccaagaagaagctggtcgtcttcacgggggtctccggctccggcaag
agctcgctcgccttcgacacgctctacgccgaggggcagcgccgctacgtcgagagcctg
tccgcctatgcccggcagttcctcgggcagatggagaagcccaagtacgacaccatccgg
ggcctgtcgcccaccatctccatcgagcagaaggcggccagcaacaacccgcgctcgacg
gtgggcaccgtcacggaggtgcacgactacctgcgcgtgctctacgcctccatcggcgtg
cagcactgccccaactgcgggcgcaaggtgggcaagcagagcgcgcagcagattgtcgac
gaaatcctcaagatgcccgctggcagcaaggtccaggtgctggcgccgctcgtcagcaac
cgaaagggcgagcacaaggacctgctgacggaggcgcagaagcgcggcttctcccgcgcg
cgcatcgacgggaagctcaagagcctggaggagcgcgtcgagctggacaagaagaccaag
cacgacatcgagctggtcatcgaccggctcgtgctcaaggcggacatcaagacgcggctc
accgactccgtggagacggcgctgcgcgagggcaagggcaccctcatcatcaccgacgag
acgggcgccgcgacggcggaccgggtgatgagcgagctcaacgcgtgcccctcctgcggc
gtgtcgttcggagacctgacgcccgcgtcgttctccttcaacaacccgctgggcatgtgc
accgactgcaacggcctgggcacccggccggagatggacccggacctcatcgtcccggac
acctcgcgcagcatccgcgacggcgccatcgagccgtgggccagcggcatgaatcgcggc
gagggctggacggcggacttcgtggagagcctggccaaggcgttcaagattgatttggac
gtgccgtacgcgaagctgtccaagcgcgagcgcgacacgctgatgaacggcgccaacggc
aagagcttcaacatccagtggggcgagggcggcaactacaaggtcgagtgggagggcctg
gtcgagcgcttgatgcgcaacttcaagacgaccacgtccgaggcccggcgcaccgagctg
cagaagtacttcagtgacaagccctgccccacgtgcaagggcgagcgcctgcgcccggag
agccgcgcggtgaaggtgcatggccactccatcgtggcgctgagccgtttgaccatcgcg
gacgcgctggccttcctgggtgcgatggcgctgtccgagcacgagcggaagatcgccacc
gagctgctgaaggagattcgcagccgcctgtccttcctggtggacgtgggcctgggctac
ctgatgctggaccgcaccgcgtccacgctgtcgggcggtgagagccagcgcatccggttg
gcgtcgcagatgggcagcgagctgacgggcgtcatctacatcctcgacgagccctccatc
ggcctgcaccagcgcgacaacggcaagctgctgaccacgctcaagcgcctgagggacctg
ggcaactccgtcatcgtcgtggagcacgacgaggagacgatggaggaggcggactggctg
gtggacttcggcccgggcgctggagagctgggcggccaggtggtgtcccagggcacgccc
aagcaggtgatggcggacgagaacagcgtgacggggggctacctgtccggccgcctggag
attgaaatccccgagcagcgccgcgcgcccaaccccaagcaccaattggtgattcaaggg
gcgaaggagaacaacctgcgcgacgtggacgcggtgattccgctgggcatcttcaccgcc
gtcaccggcgtgtccggcgccggcaagtccacgctcatcaacgagatcctcttccccgcg
ctggcccggcacctgtacgagagccgcgaggcccccggcaagcacaaggccgtgctgggc
gtggagcacctggacaaggtcatcgacatcgaccagcggcccatcggccgcacgccgcgc
agcaaccccgccacgtacacgaagctgttcgacaccatccgcgacgtgttcgcgctgacg
ccggaggcccgcgcgttcggctatggcccggggcgcttcagcttcaacgtgaagggcggc
cggtgcgaggcgtgcgagggcgacggcgtcaagctggtggagatgcacttcctggcggac
gtgtacgtgccctgcgaggtgtgcggcggcaagcgcttcaacgaggcgacgctgcgcgtg
cgctacaaggggaagaacatcgcggagacgctggacatgagcgtgcgcgaggcgatggag
cacttcagcgcgcacaaggacatcatgcgcgtgctccagacgctgagcgacgtgggcctg
ggctacatccgcctgggacagccctcccccaccctgtccggcggcgaggcccagcgcatc
aagctggcgcgagagctggcgcgcgtggccaccggccgcacgctctacatcctggatgag
cccaccaccggcctgcacttcgaggacatccgcaagctgctgtccgtgctcaaccggctg
gtggccgcgggcaacagcgtgctcgtcatcgagcacaacctggatgtcatcaagagcgcg
gactggctcatcgacatggggcccgagggcggcgccggcggaggccaggtgatggccgtg
ggcacgccggagagcgtcgccaaggtggtcggcagccacacgggccgctacctggcgcac
gtgctgggcaagtcacggcgcgcgcgcgtgggcaagcgcgtggatggacccgcgccgctg
gcgaatggcgcgctgcgctga
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