KEGG   Myxococcus stipitatus: MYSTI_02998
Entry
MYSTI_02998       CDS       T02436                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
msd  Myxococcus stipitatus
Pathway
msd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:msd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MYSTI_02998
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msd03400]
    MYSTI_02998
DNA repair and recombination proteins [BR:msd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MYSTI_02998
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      MYSTI_02998
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N RsgA_GTPase AAA_29 AAA_16 nSTAND1 AAA_21 AAA_25 Viral_helicase1 AAA_22 DnaJ_CXXCXGXG cobW MMR_HSR1 Zn_ribbon_3 MurT_C Zn_Tnp_IS91
Other DBs
NCBI-ProteinID: AGC44314
UniProt: L7UCX4
LinkDB
Position
complement(3796630..3799530)
AA seq 966 aa
MSEPDVISLRGAKEHNLKNVSLDIPKKKLVVFTGVSGSGKSSLAFDTLYAEGQRRYVESL
SAYARQFLGQMEKPKYDTIRGLSPTISIEQKAASNNPRSTVGTVTEVHDYLRVLYASIGV
QHCPNCGRKVGKQSAQQIVDEILKMPAGSKVQVLAPLVSNRKGEHKDLLTEAQKRGFSRA
RIDGKLKSLEERVELDKKTKHDIELVIDRLVLKADIKTRLTDSVETALREGKGTLIITDE
TGAATADRVMSELNACPSCGVSFGDLTPASFSFNNPLGMCTDCNGLGTRPEMDPDLIVPD
TSRSIRDGAIEPWASGMNRGEGWTADFVESLAKAFKIDLDVPYAKLSKRERDTLMNGANG
KSFNIQWGEGGNYKVEWEGLVERLMRNFKTTTSEARRTELQKYFSDKPCPTCKGERLRPE
SRAVKVHGHSIVALSRLTIADALAFLGAMALSEHERKIATELLKEIRSRLSFLVDVGLGY
LMLDRTASTLSGGESQRIRLASQMGSELTGVIYILDEPSIGLHQRDNGKLLTTLKRLRDL
GNSVIVVEHDEETMEEADWLVDFGPGAGELGGQVVSQGTPKQVMADENSVTGGYLSGRLE
IEIPEQRRAPNPKHQLVIQGAKENNLRDVDAVIPLGIFTAVTGVSGAGKSTLINEILFPA
LARHLYESREAPGKHKAVLGVEHLDKVIDIDQRPIGRTPRSNPATYTKLFDTIRDVFALT
PEARAFGYGPGRFSFNVKGGRCEACEGDGVKLVEMHFLADVYVPCEVCGGKRFNEATLRV
RYKGKNIAETLDMSVREAMEHFSAHKDIMRVLQTLSDVGLGYIRLGQPSPTLSGGEAQRI
KLARELARVATGRTLYILDEPTTGLHFEDIRKLLSVLNRLVAAGNSVLVIEHNLDVIKSA
DWLIDMGPEGGAGGGQVMAVGTPESVAKVVGSHTGRYLAHVLGKSRRARVGKRVDGPAPL
ANGALR
NT seq 2901 nt   +upstreamnt  +downstreamnt
atgtccgagcccgacgtcatttccctccgaggcgccaaggagcacaacctcaagaacgtc
tccctggacatccccaagaagaagctggtcgtcttcacgggggtctccggctccggcaag
agctcgctcgccttcgacacgctctacgccgaggggcagcgccgctacgtcgagagcctg
tccgcctatgcccggcagttcctcgggcagatggagaagcccaagtacgacaccatccgg
ggcctgtcgcccaccatctccatcgagcagaaggcggccagcaacaacccgcgctcgacg
gtgggcaccgtcacggaggtgcacgactacctgcgcgtgctctacgcctccatcggcgtg
cagcactgccccaactgcgggcgcaaggtgggcaagcagagcgcgcagcagattgtcgac
gaaatcctcaagatgcccgctggcagcaaggtccaggtgctggcgccgctcgtcagcaac
cgaaagggcgagcacaaggacctgctgacggaggcgcagaagcgcggcttctcccgcgcg
cgcatcgacgggaagctcaagagcctggaggagcgcgtcgagctggacaagaagaccaag
cacgacatcgagctggtcatcgaccggctcgtgctcaaggcggacatcaagacgcggctc
accgactccgtggagacggcgctgcgcgagggcaagggcaccctcatcatcaccgacgag
acgggcgccgcgacggcggaccgggtgatgagcgagctcaacgcgtgcccctcctgcggc
gtgtcgttcggagacctgacgcccgcgtcgttctccttcaacaacccgctgggcatgtgc
accgactgcaacggcctgggcacccggccggagatggacccggacctcatcgtcccggac
acctcgcgcagcatccgcgacggcgccatcgagccgtgggccagcggcatgaatcgcggc
gagggctggacggcggacttcgtggagagcctggccaaggcgttcaagattgatttggac
gtgccgtacgcgaagctgtccaagcgcgagcgcgacacgctgatgaacggcgccaacggc
aagagcttcaacatccagtggggcgagggcggcaactacaaggtcgagtgggagggcctg
gtcgagcgcttgatgcgcaacttcaagacgaccacgtccgaggcccggcgcaccgagctg
cagaagtacttcagtgacaagccctgccccacgtgcaagggcgagcgcctgcgcccggag
agccgcgcggtgaaggtgcatggccactccatcgtggcgctgagccgtttgaccatcgcg
gacgcgctggccttcctgggtgcgatggcgctgtccgagcacgagcggaagatcgccacc
gagctgctgaaggagattcgcagccgcctgtccttcctggtggacgtgggcctgggctac
ctgatgctggaccgcaccgcgtccacgctgtcgggcggtgagagccagcgcatccggttg
gcgtcgcagatgggcagcgagctgacgggcgtcatctacatcctcgacgagccctccatc
ggcctgcaccagcgcgacaacggcaagctgctgaccacgctcaagcgcctgagggacctg
ggcaactccgtcatcgtcgtggagcacgacgaggagacgatggaggaggcggactggctg
gtggacttcggcccgggcgctggagagctgggcggccaggtggtgtcccagggcacgccc
aagcaggtgatggcggacgagaacagcgtgacggggggctacctgtccggccgcctggag
attgaaatccccgagcagcgccgcgcgcccaaccccaagcaccaattggtgattcaaggg
gcgaaggagaacaacctgcgcgacgtggacgcggtgattccgctgggcatcttcaccgcc
gtcaccggcgtgtccggcgccggcaagtccacgctcatcaacgagatcctcttccccgcg
ctggcccggcacctgtacgagagccgcgaggcccccggcaagcacaaggccgtgctgggc
gtggagcacctggacaaggtcatcgacatcgaccagcggcccatcggccgcacgccgcgc
agcaaccccgccacgtacacgaagctgttcgacaccatccgcgacgtgttcgcgctgacg
ccggaggcccgcgcgttcggctatggcccggggcgcttcagcttcaacgtgaagggcggc
cggtgcgaggcgtgcgagggcgacggcgtcaagctggtggagatgcacttcctggcggac
gtgtacgtgccctgcgaggtgtgcggcggcaagcgcttcaacgaggcgacgctgcgcgtg
cgctacaaggggaagaacatcgcggagacgctggacatgagcgtgcgcgaggcgatggag
cacttcagcgcgcacaaggacatcatgcgcgtgctccagacgctgagcgacgtgggcctg
ggctacatccgcctgggacagccctcccccaccctgtccggcggcgaggcccagcgcatc
aagctggcgcgagagctggcgcgcgtggccaccggccgcacgctctacatcctggatgag
cccaccaccggcctgcacttcgaggacatccgcaagctgctgtccgtgctcaaccggctg
gtggccgcgggcaacagcgtgctcgtcatcgagcacaacctggatgtcatcaagagcgcg
gactggctcatcgacatggggcccgagggcggcgccggcggaggccaggtgatggccgtg
ggcacgccggagagcgtcgccaaggtggtcggcagccacacgggccgctacctggcgcac
gtgctgggcaagtcacggcgcgcgcgcgtgggcaagcgcgtggatggacccgcgccgctg
gcgaatggcgcgctgcgctga

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