Myxococcus stipitatus: MYSTI_03024
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Entry
MYSTI_03024 CDS
T02436
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
msd
Myxococcus stipitatus
Pathway
msd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
msd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MYSTI_03024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msd03400
]
MYSTI_03024
DNA repair and recombination proteins [BR:
msd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MYSTI_03024
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MYSTI_03024
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
DUF87
AAA_22
Kinesin
KOW6_SPT5
Motif
Other DBs
NCBI-ProteinID:
AGC44340
UniProt:
L7U910
LinkDB
All DBs
Position
3837279..3839381
Genome browser
AA seq
700 aa
AA seq
DB search
MPEFQIVSEHQPGGDQPRAIGELTEGVLRGDRYQTLLGVTGSGKTFTMANIIANVQRPTL
VIAHNKTLAAQLYGEFKTLFPNNAVEYFVSYYDYYQPEAYVPSTDTFIEKDSSINDNIER
MRHSATHSLRTRDDVVIVASVSCIYGLGAARSYVDLAVRVDTGGEMGRDAFMRRLVEGQY
ERNDMDFHRGTFRARGDTVEVFPAYEEERAVRVSFFGDEVERITEFDPLRGVTLGTLEKI
VIFPASHYVAGEDVRKRALQTIRDELTDQLQTFKRDNKLVEAQRLEQRTLFDLEMIEQVG
YCNGIENYSRHFSGRGVGEPPPCLIDYFPRNILVLIDESHQTVPQIGAMYRGDRARKETL
VNFGFRMPSALDNRPLKFGEFEELVPQAVFVSATPSEYELQKSQGVVVEQIIRPTGLTDP
EVETRPVGNQVDDLLEEVRLRVSRNERVLVTTLTKRMAEDLTEYYADVGVRVRYLHSDID
AIERTAIIRDLRKGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSHVSLIQTIGR
AARNLNGRVIMYADSITDSMKKALEETTRRREIQRKHNQEHGITPRSVKSNITDLSEHLY
DADGGGTLPMAAEGEDDLLDAKEIKRLIAEYTRDMLSAAESMEFEKAAEYRDRVQQLKDM
DMGLKPASRSLLKAPAKGKEDDAPKRGRGKGRTSRPRGRR
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagttccagatcgtcagcgaacaccagcccgggggcgaccagccgagggccatt
ggagagctcacggagggcgtgcttcggggcgaccgctaccagaccctcctgggcgttacg
gggtcgggcaagaccttcaccatggcgaacatcatcgccaacgtgcagcggcccacgctg
gtcatcgcccacaacaagacgctggccgcgcagctgtacggcgagttcaagacgctcttc
ccgaacaacgccgtcgagtacttcgtctcgtactacgactactaccagcccgaggcctac
gttccgtcgacggacaccttcatcgagaaggactcgtccatcaacgacaacatcgagcgg
atgcgccactccgccacgcactcgctgcgcacgcgcgacgacgtggtgattgtggcgagc
gtgtcctgcatctatggcctgggcgcggcgcgcagctacgtggacctcgcggtgcgcgtg
gacaccgggggcgagatggggcgcgatgccttcatgcgccgcctggtggaaggccagtac
gagcgcaacgacatggacttccaccgaggcaccttccgcgcgcgcggagacacggtggag
gtgttcccggcctacgaggaggagcgcgccgtacgcgtcagcttcttcggcgacgaggtg
gagcgcatcaccgagttcgacccgctgcgcggcgtgacgctgggcacgctggagaagatc
gtcatcttccccgccagccactacgtcgcgggcgaggacgtgcgcaagcgcgcgttgcag
accatccgcgacgagctgaccgaccagctccagaccttcaagcgcgacaacaagctggtg
gaggcgcagcggttggagcagcgcacgttgttcgacttggagatgatcgagcaggtcggc
tactgcaacggcatcgagaactactcgcggcacttctcgggacgcggcgtcggcgagccg
cccccgtgcctcatcgactacttcccgcgcaacatcctggtcctcatcgacgagagccat
cagacggttccgcagattggcgcgatgtaccgaggcgaccgcgcgcgcaaggagacgctg
gtcaactttggcttccgcatgcccagcgccctggacaaccgccccctgaagttcggcgag
ttcgaggagctggttccgcaggccgtcttcgtctccgccacgccgtccgagtacgagctg
cagaagtcccagggcgtggtggtggagcagatcatccgccccacgggtctgacggacccg
gaggtggagacgcgtccggtgggcaatcaggtggacgacctgctcgaggaggtccgcctg
cgcgtcagccgcaacgagcgcgtcctcgtgacgacgctcaccaagcgcatggcggaggac
ctcaccgagtactacgccgacgtgggcgtgcgcgtgcgctacctgcactcggacatcgac
gccattgaacgcaccgccatcatccgcgacctgcgcaagggcgagttcgacgtgctcgtg
ggcatcaacctcctgcgcgagggcctggacatccccgaggtgtcgctggtggccatcctc
gacgcggacaaggaaggcttcctgcgcagccacgtgtcgctcatccagaccatcggccgc
gccgcgcgcaacctgaatggccgcgtcatcatgtacgcggactccatcaccgactcgatg
aagaaggcgctggaggagacgacgcgtcggcgtgaaatccagcgcaagcacaaccaggag
cacggcatcaccccgcgctcggtcaagagcaacatcacggacctctccgagcacctctac
gacgcggacggcggtggcacgctgcccatggcggccgagggcgaggacgacctcctggac
gccaaggagatcaaacggctcatcgcggagtacacgcgggacatgctcagcgccgcggag
tcgatggagttcgagaaggccgccgagtaccgggaccgggtccagcagctcaaggacatg
gacatggggctgaagcccgcctcgcgttcgctgctcaaggcccccgccaagggcaaggag
gacgacgcgcccaagcgagggcgaggcaagggccggacgtctcgcccccggggacgtcgc
tag
DBGET
integrated database retrieval system
