Myxococcus stipitatus: MYSTI_03580
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Entry
MYSTI_03580 CDS
T02436
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
msd
Myxococcus stipitatus
Pathway
msd03030
DNA replication
msd03410
Base excision repair
msd03420
Nucleotide excision repair
msd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MYSTI_03580
03410 Base excision repair
MYSTI_03580
03420 Nucleotide excision repair
MYSTI_03580
03440 Homologous recombination
MYSTI_03580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msd03032
]
MYSTI_03580
03400 DNA repair and recombination proteins [BR:
msd03400
]
MYSTI_03580
Enzymes [BR:
msd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MYSTI_03580
DNA replication proteins [BR:
msd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MYSTI_03580
DNA repair and recombination proteins [BR:
msd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MYSTI_03580
NER (nucleotide excision repair)
GGR (global genome repair) factors
MYSTI_03580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
HHH
HTH_23
IMS_HHH
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AGC44886
UniProt:
L7U7K5
LinkDB
All DBs
Position
4506698..4509427
Genome browser
AA seq
909 aa
AA seq
DB search
MADTSPPRSAPTLVLIDASGFIFRAYHAIPPLTTSKGVPTNAVLGFTRMVLKALRDLKPT
HVALAFDKESRAERQKLDPNYKAHREGPPEDLVPQFGLIRRVTEALNLPVLEMPGWEADD
VIGTLSQKARAEGFQVQVVTGDKDFIQIVDEDVRLFDPMKEVHTGPAEVKERLGIEPRQM
RDYLALIGDAVDNVAKVPGIGPKTATELIQQFGDVDTLLSRLEEVKKPKIRDAIASHRES
LLLARQLVSFKMDLPLDVRVSELTRKAPDAAKARELFTELEFYALLKELPAQGASESASA
EPAKEKPAPLATATALVTTDAELVALAEAVRAAGSVSVIPAYEGMPFAAKLVGVGLALPD
ATLHYVPLRHAVLGATQVRPDAFTAAMKGVLEDPAVKKGGHDLKALTLVLANEGIDLGGA
HDDVELLSYLLNPSRREHALVDLARERLASELPGLPPAAEGKRGKKDRPLADHSPEELAS
GFAVRAEAARRLAPELWKELEEAKLAQLARELELPLLPILARMERRGVSLDTQELARISV
KVDAAVESQVKEVYKHAGREFNIGSNPQLVQVLFTDLNLPIIKRGKTGPSADQEVLEKLA
EEHPLPNAIIEYRSLSKLKSTYLDTLPTLVAADKRIHTTYHQAATATGRLSSTDPNLQNI
PVRTELGREIRRAFVAAEGHQLVSADYSQVELRLLAHIADDPVLIEAFRQDEDVHSRTAA
EVFGVAPDQVDREQRRVAKMVNFGIAYGLSPHGLSTRLGIPQETARDIIERYFTRYAGIR
RYLEDTVNNARKTGYVETLYGRRRYMADLMSKNRAVAQAAERAAINMPIQGTAADLIKKA
MLVVEADLRAKGLRTVMLLQVHDELLLEAPDAEVEQVKGLVAAGMANVATLKVPLKVDVG
SGRSWADAH
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaccagccctccgcgctccgcgcccaccctggtcctcatcgacgcgtccggc
ttcatcttccgcgcctaccacgccattccgccactcacgacgagcaagggcgtgcccacc
aacgccgtgctcggcttcacgcgcatggtgctcaaggcgctgcgggacttgaagcccacc
cacgtggcgctcgccttcgacaaggagagccgcgcggagcgtcagaaactcgaccccaac
tacaaggcgcaccgcgaaggccctcccgaggacctggtgccccagttcgggctcatccgc
cgcgtgacggaggcgctcaacctgccggtgctggagatgccgggctgggaggccgacgac
gtcatcggcacgctctcccagaaggcccgggcggagggcttccaggtccaggtcgtcacc
ggggacaaggacttcatccagatcgtggatgaggacgtgcgcctgttcgacccgatgaag
gaggtccacaccgggcccgcggaggtgaaggagcggctgggaatcgagccccggcagatg
cgcgactacctggcgctcatcggcgacgcggtggacaacgtggccaaggtgccgggcatc
ggccccaagacagccaccgagctcatccaacagtttggcgacgtggacacactgttgtca
cggctcgaagaggtgaagaagcccaagattcgcgacgccatcgcctcgcaccgcgagagc
ctcctgctcgcccggcagctggtgtccttcaagatggacctgccgctggatgttcgcgtg
tcggagctgacgcgcaaggcgccggatgccgcgaaggcccgggagctcttcacggagctg
gagttctacgcgctgctcaaggagctccccgcgcagggcgcgtccgagtccgcgtccgcc
gagcccgcgaaggagaagcccgcgccgctggccaccgccaccgcgctggttaccaccgac
gcggagctcgtggcgctggcggaggccgtgcgcgccgcgggctccgtcagcgtgattccc
gcctacgaggggatgcccttcgccgcgaagctggtgggcgtgggcctggcgcttccggat
gcgacgctccactacgtgccgctgcgccacgcggtgctcggggcgacgcaggtccggccc
gatgccttcaccgccgcgatgaagggcgtgctggaggacccggcggtgaagaagggcggg
catgacctcaaggccctcaccctggtgctggccaacgagggaatcgacctgggcggggcc
cacgacgacgtggagctcttgagctacctgctcaacccgtcgcgccgtgagcacgcgctc
gtggacctggcgcgtgagcggctggcctcggagctgcccggcctgcccccggcggcggag
ggcaagcgcgggaagaaggaccggccgctggcggaccactcgccggaggagctggcctcg
ggcttcgcggtgcgcgcggaggcggcgcgccggctggcgccggagctgtggaaggagctc
gaggaggcgaagctggcgcagctcgctcgggagctggagctcccgctgctgcccatcctc
gcgcgcatggagcggcggggtgtgagcctggacacgcaggaactcgcgcgcatctcggtg
aaggtggacgcggccgtcgagtcgcaggtgaaggaggtctacaaacacgcgggccgcgag
ttcaacatcggctccaacccgcagctggtgcaggtgctcttcaccgacctgaacctgccc
atcatcaagcgcggcaagacgggcccgtccgcggaccaggaggtgctggagaagctggcc
gaggagcacccgctgcccaacgccatcatcgagtaccggagcctgtccaagctcaagagc
acctacctggacacgctgcccacgctggtggcggccgacaagcgcatccacacgacgtac
caccaggcggccaccgccacggggcgcctgtcgtccacggaccccaacctccagaacatc
cccgtgcgcacggagctgggccgcgagattcgccgcgccttcgtcgccgccgagggccac
cagctggtcagcgccgactacagccaggtggagctgcggctgctggcgcacatcgcggat
gaccccgtcctcatcgaggccttccggcaggacgaggacgtgcacagccgcaccgccgcg
gaggtgttcggcgtcgctccggaccaggtggaccgcgagcagcgccgcgtggcgaagatg
gtgaacttcggcatcgcctacggcctgtccccgcacggcctgtcgacgcggctgggcatc
ccccaggagacggcgcgcgacatcatcgagcgctacttcacgcgctacgcgggcatccgc
cgctacctggaggacaccgtcaacaacgcccggaagacgggctacgtggagacgctctac
ggccgccgccgctacatggcggacctgatgtcgaagaaccgcgccgtggcccaggccgcc
gagcgcgccgccatcaacatgccgattcagggcacggccgcggacctcatcaagaaggcc
atgctggtggtggaggcggacctgcgcgcgaaggggctgcgcaccgtgatgctgctgcag
gtgcatgacgaattgctgctcgaggcgcccgacgcggaagtggagcaggtgaaggggctg
gtggcggcgggcatggcgaacgtggccacgctcaaggtgccgctcaaggtggatgtgggc
tcggggcggagctgggcggacgcgcactga
DBGET
integrated database retrieval system
