KEGG   Myxococcus stipitatus: MYSTI_04334
Entry
MYSTI_04334       CDS       T02436                                 
Name
(GenBank) ATP-dependent DNA helicase RecQ
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
msd  Myxococcus stipitatus
Pathway
msd03420  Nucleotide excision repair
msd03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:msd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MYSTI_04334
   03430 Mismatch repair
    MYSTI_04334
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msd03400]
    MYSTI_04334
Enzymes [BR:msd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MYSTI_04334
DNA repair and recombination proteins [BR:msd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MYSTI_04334
   MMR (mismatch excision repair)
    Other MMR factors
     MYSTI_04334
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C UvrD_C_2 DEAD AAA_30 AAA_11
Other DBs
NCBI-ProteinID: AGC45632
UniProt: L7UDE4
LinkDB
Position
complement(5576935..5579145)
AA seq 736 aa
MSWRHWNGGRTLSTVKVVVRKSGQVIETVARPLREAEGGPAVVYRRRFWRYAAGSIDLDS
RPLAPDEGNGRPAGSAQEERSEPRAVPATDDAGDREAIRTASAGVRMLVEAGPGTGKTEM
AAQRIAGLIRAGLSPGQLLVLSFSRSAVRTLTRRLSRVAGPEDRVLEELRHVSIRTFDSW
VFRMLRLLGGTPSALLAREHDANIAELTALIAGSRRDDVRALAGDRRHLIVDEFQDLPGV
RGELVLALLELLAPPGHPGCGFTILGDPAQAIYGFAARNTAGAVFPGPAEYWKRVLSAYG
AGLDVRTLRRNYRANAPLAGLSAKLRGVLLGPRPDEEKLRVIRESIAALPAPTQPIGPDW
MLNGDAGNRAVLTRTNGEALRVMQKLFGSEVEGPMIPVRLRAGGHALLPPAWIATLLRRL
RSPEPTRSQFTKIYAHVTGQGDMATHLKSLLPPEDVAWARLARASGAAEDTSSISVSDLR
ARLNWPDAFPDDQPSGEEGVIISTIHQSKGMEFDIVTILDARDDDGAPGEDSEAPAKTSA
GEEASVGYVAITRAGGVLERMDGDAIHPPPRSRKFQGERQRLCHWRAGWVNLEMGLRGDL
DPFGFVNPVLHDGAAGVESLQEFLLENARRLEGHKVMLCKQMAHGKALWNVHLQRGSSPD
RLIGRTAHQLTYDLMRLLSEKGYSLPKTIMNLRIAGVGTVTSEAEFELEEPDRSSRLWLG
VSLFGMGDFKPLRKKS
NT seq 2211 nt   +upstreamnt  +downstreamnt
gtgagttggaggcattggaatggggggcgaacgttgagcaccgtcaaggtcgttgtccgc
aaatccgggcaggtgattgaaacggttgcgcgaccgctccgcgaggcggaaggtggaccc
gcggttgtctaccgcaggaggttctggcgctacgctgctggttccatcgacttggactcc
cggccactcgcacctgacgagggcaatggccgtccagccggttccgctcaggaggagcgt
tccgaaccgcgcgcagtgcctgcaacggacgatgcgggggaccgcgaggccatccgcacc
gccagcgcgggcgtgcgcatgctcgtggaggcagggcctggaacaggcaagaccgaaatg
gcggcgcagcggatcgctgggttgattcgtgctggattgtctccggggcagcttctggtc
ttgagcttctccagaagcgcggtgagaaccctgacgcgacggctctctcgtgttgccggt
cctgaggaccgggtgctcgaggagctccggcacgtctccatccggaccttcgactcgtgg
gtcttccggatgctgcggctgcttggtggtacgccatccgctctgcttgctcgcgagcat
gatgcgaacattgcggaactcacggcgctgattgctgggagtcgtcgggatgacgtgcgc
gcccttgccggagaccgacgccacctcatcgtagatgagttccaggatttgccgggcgtc
cggggcgagctggtgctggcgttgctggagctgctcgccccgccaggacacccaggctgc
ggcttcaccatcctcggggaccccgcgcaggcgatctacggcttcgccgctcgtaacaca
gccggtgccgtcttccctgggcctgcggagtattggaaacgcgtcctgagcgcctacggc
gcagggctggatgtacggacgcttcggcggaactatcgtgccaatgctccgttggcaggt
ctctccgcgaagctccgcggagtgttgctcggccctcgacctgacgaggagaagcttcgt
gtcatccgggaatccattgcggccttgcctgctccgacgcagcccatcggtccggactgg
atgttgaatggcgatgccggcaatcgtgcggtactcacgcgaacgaatggtgaagcactt
cgcgtcatgcagaagctgttcgggagcgaagtcgagggtccgatgattcccgtccgcctg
cgggcgggcggccacgcgcttctacctccagcatggatcgccacgttgctgcgacggctc
cggtctccagaacccactcgctcgcagttcacgaagatctatgcacacgtgacggggcag
ggagacatggccacccacctgaagtcccttctcccacccgaggatgtggcttgggccagg
ctcgcccgtgcgagcggagcggcggaggacacgagctccatctccgtgtcagacctgcgc
gcacgcctgaactggcccgatgccttccccgacgaccagccgtcgggcgaagagggggtc
atcatctccaccatccaccagtcgaagggcatggagttcgatatcgtcacgatcctggat
gcgcgggacgacgacggcgcgccgggcgaagactcggaggcgccagcgaaaacctccgct
ggagaggaggccagcgtcggctatgtcgccatcacacgggccggtggggtcctggagcgg
atggacggagatgcgatccacccaccaccacggagccggaagttccagggcgagcggcaa
cggctctgtcactggcgagctggatgggtcaacctcgagatggggttgaggggagacctc
gacccgttcggcttcgtcaacccggtccttcacgacggggctgctggcgtggagtcgcta
caggagttcctgttggagaatgcgcgccgcctcgaagggcacaaagtgatgctgtgcaag
cagatggcgcatggcaaggccctctggaacgtgcaccttcagcgcgggagctcgccggac
cggctgatcggccgcactgcgcaccaactgacctacgacctgatgcgcctgttgagcgag
aagggctactctctgccgaagaccatcatgaacctgcggatcgctggcgtcggcacggtc
acttccgaggccgagttcgagcttgaagagcctgaccgctccagtcggctctggctcggc
gtcagtctgttcggcatgggcgatttcaagccgctcaggaagaagagctga

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