Myxococcus stipitatus: MYSTI_04334
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Entry
MYSTI_04334 CDS
T02436
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
msd
Myxococcus stipitatus
Pathway
msd03420
Nucleotide excision repair
msd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MYSTI_04334
03430 Mismatch repair
MYSTI_04334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msd03400
]
MYSTI_04334
Enzymes [BR:
msd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MYSTI_04334
DNA repair and recombination proteins [BR:
msd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MYSTI_04334
MMR (mismatch excision repair)
Other MMR factors
MYSTI_04334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
DEAD
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AGC45632
UniProt:
L7UDE4
LinkDB
All DBs
Position
complement(5576935..5579145)
Genome browser
AA seq
736 aa
AA seq
DB search
MSWRHWNGGRTLSTVKVVVRKSGQVIETVARPLREAEGGPAVVYRRRFWRYAAGSIDLDS
RPLAPDEGNGRPAGSAQEERSEPRAVPATDDAGDREAIRTASAGVRMLVEAGPGTGKTEM
AAQRIAGLIRAGLSPGQLLVLSFSRSAVRTLTRRLSRVAGPEDRVLEELRHVSIRTFDSW
VFRMLRLLGGTPSALLAREHDANIAELTALIAGSRRDDVRALAGDRRHLIVDEFQDLPGV
RGELVLALLELLAPPGHPGCGFTILGDPAQAIYGFAARNTAGAVFPGPAEYWKRVLSAYG
AGLDVRTLRRNYRANAPLAGLSAKLRGVLLGPRPDEEKLRVIRESIAALPAPTQPIGPDW
MLNGDAGNRAVLTRTNGEALRVMQKLFGSEVEGPMIPVRLRAGGHALLPPAWIATLLRRL
RSPEPTRSQFTKIYAHVTGQGDMATHLKSLLPPEDVAWARLARASGAAEDTSSISVSDLR
ARLNWPDAFPDDQPSGEEGVIISTIHQSKGMEFDIVTILDARDDDGAPGEDSEAPAKTSA
GEEASVGYVAITRAGGVLERMDGDAIHPPPRSRKFQGERQRLCHWRAGWVNLEMGLRGDL
DPFGFVNPVLHDGAAGVESLQEFLLENARRLEGHKVMLCKQMAHGKALWNVHLQRGSSPD
RLIGRTAHQLTYDLMRLLSEKGYSLPKTIMNLRIAGVGTVTSEAEFELEEPDRSSRLWLG
VSLFGMGDFKPLRKKS
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
gtgagttggaggcattggaatggggggcgaacgttgagcaccgtcaaggtcgttgtccgc
aaatccgggcaggtgattgaaacggttgcgcgaccgctccgcgaggcggaaggtggaccc
gcggttgtctaccgcaggaggttctggcgctacgctgctggttccatcgacttggactcc
cggccactcgcacctgacgagggcaatggccgtccagccggttccgctcaggaggagcgt
tccgaaccgcgcgcagtgcctgcaacggacgatgcgggggaccgcgaggccatccgcacc
gccagcgcgggcgtgcgcatgctcgtggaggcagggcctggaacaggcaagaccgaaatg
gcggcgcagcggatcgctgggttgattcgtgctggattgtctccggggcagcttctggtc
ttgagcttctccagaagcgcggtgagaaccctgacgcgacggctctctcgtgttgccggt
cctgaggaccgggtgctcgaggagctccggcacgtctccatccggaccttcgactcgtgg
gtcttccggatgctgcggctgcttggtggtacgccatccgctctgcttgctcgcgagcat
gatgcgaacattgcggaactcacggcgctgattgctgggagtcgtcgggatgacgtgcgc
gcccttgccggagaccgacgccacctcatcgtagatgagttccaggatttgccgggcgtc
cggggcgagctggtgctggcgttgctggagctgctcgccccgccaggacacccaggctgc
ggcttcaccatcctcggggaccccgcgcaggcgatctacggcttcgccgctcgtaacaca
gccggtgccgtcttccctgggcctgcggagtattggaaacgcgtcctgagcgcctacggc
gcagggctggatgtacggacgcttcggcggaactatcgtgccaatgctccgttggcaggt
ctctccgcgaagctccgcggagtgttgctcggccctcgacctgacgaggagaagcttcgt
gtcatccgggaatccattgcggccttgcctgctccgacgcagcccatcggtccggactgg
atgttgaatggcgatgccggcaatcgtgcggtactcacgcgaacgaatggtgaagcactt
cgcgtcatgcagaagctgttcgggagcgaagtcgagggtccgatgattcccgtccgcctg
cgggcgggcggccacgcgcttctacctccagcatggatcgccacgttgctgcgacggctc
cggtctccagaacccactcgctcgcagttcacgaagatctatgcacacgtgacggggcag
ggagacatggccacccacctgaagtcccttctcccacccgaggatgtggcttgggccagg
ctcgcccgtgcgagcggagcggcggaggacacgagctccatctccgtgtcagacctgcgc
gcacgcctgaactggcccgatgccttccccgacgaccagccgtcgggcgaagagggggtc
atcatctccaccatccaccagtcgaagggcatggagttcgatatcgtcacgatcctggat
gcgcgggacgacgacggcgcgccgggcgaagactcggaggcgccagcgaaaacctccgct
ggagaggaggccagcgtcggctatgtcgccatcacacgggccggtggggtcctggagcgg
atggacggagatgcgatccacccaccaccacggagccggaagttccagggcgagcggcaa
cggctctgtcactggcgagctggatgggtcaacctcgagatggggttgaggggagacctc
gacccgttcggcttcgtcaacccggtccttcacgacggggctgctggcgtggagtcgcta
caggagttcctgttggagaatgcgcgccgcctcgaagggcacaaagtgatgctgtgcaag
cagatggcgcatggcaaggccctctggaacgtgcaccttcagcgcgggagctcgccggac
cggctgatcggccgcactgcgcaccaactgacctacgacctgatgcgcctgttgagcgag
aagggctactctctgccgaagaccatcatgaacctgcggatcgctggcgtcggcacggtc
acttccgaggccgagttcgagcttgaagagcctgaccgctccagtcggctctggctcggc
gtcagtctgttcggcatgggcgatttcaagccgctcaggaagaagagctga
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