KEGG   Myxococcus stipitatus: MYSTI_04576
Entry
MYSTI_04576       CDS       T02436                                 
Name
(GenBank) RNA polymerase sigma-B factor
  KO
K03089  RNA polymerase sigma-32 factor
Organism
msd  Myxococcus stipitatus
Brite
KEGG Orthology (KO) [BR:msd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msd03021]
    MYSTI_04576
Transcription machinery [BR:msd03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MYSTI_04576
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r3 UCR_14kD HTH_11 Fe_dep_repress EutK_C
Other DBs
NCBI-ProteinID: AGC45868
UniProt: L7UCV2
LinkDB
Position
5906471..5907358
AA seq 295 aa
MQASTEQSSNSGSLAMYLSEINHYNLLTVEEEQALARTFIRGELAAGHRLVTSNLRFVVK
VAYEYRSYGIKMSDLIQEGNIGLMKAVQKFDPDKGIRLISYAVWWIRAYIQNYILKSWSL
VKLGTTQAQRKLFFSLARTRRELEKFGNGEAVVNVEEIARRLHVKPGEVREMEQRMGGRD
LSLDAPMGEDGGNSHVDFVVSAAAPQDDEFADKEEAGLINARVRTALMRLDPRERFIIEQ
RVMNERPMTLKELGEHFGFSRERARQLEIRAKDKLKAELAALMAEVDPEAASLQQ
NT seq 888 nt   +upstreamnt  +downstreamnt
atgcaggcgtccaccgagcagtcgtccaactctggctccctggcgatgtacctctcggag
atcaaccactacaacctcctcaccgtggaggaagagcaggcgctggcgcgcaccttcatc
cgaggagagctggccgcgggccaccggctcgtcacctccaaccttcgcttcgtcgtgaag
gtcgcctacgagtaccgctcctacggcatcaagatgtcggacctcatccaggagggaaac
atcggcctgatgaaggcggtgcagaagttcgacccggacaagggcatccgcctcatctcg
tacgcggtctggtggattcgcgcatacatccagaactacatcctcaagagctggtcgctc
gtgaagctcggcaccacgcaagcgcagcgaaagctgttcttcagcctggcgcgcacccgg
cgcgagctggagaagttcggcaacggcgaggccgtcgtcaacgtggaggagattgctcgc
cggctgcacgtgaagccaggcgaggtgcgggagatggagcagcgcatgggcggccgggac
ttgtccctggacgcgcccatgggtgaggacggcggcaacagccacgtggacttcgtggtc
agcgccgccgcgccccaggacgatgagttcgccgacaaggaagaggcgggcctcatcaac
gcccgcgtccgcaccgcgctgatgcgcctggaccctcgcgagcgcttcatcatcgagcag
cgggtcatgaacgagcgacccatgacgctcaaggagctgggcgagcatttcgggttctcc
cgggaacgggcccgtcagctggagattcgcgccaaggacaagctgaaggcggagctggcg
gcgctgatggcggaggtggacccggaggcggcgtccctgcagcagtag

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