Myxococcus stipitatus: MYSTI_04610
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Entry
MYSTI_04610 CDS
T02436
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
msd
Myxococcus stipitatus
Pathway
msd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
msd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MYSTI_04610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msd03021
]
MYSTI_04610
03400 DNA repair and recombination proteins [BR:
msd03400
]
MYSTI_04610
Enzymes [BR:
msd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MYSTI_04610
Transcription machinery [BR:
msd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MYSTI_04610
DNA repair and recombination proteins [BR:
msd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MYSTI_04610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AGC45902
UniProt:
L7UE72
LinkDB
All DBs
Position
complement(5952521..5953543)
Genome browser
AA seq
340 aa
AA seq
DB search
MADTFVAKNWRDLIKPRRMEVDQDSLTPTYGKFVAEPLERGFGTTLGNSLRRVLLSSLQG
AAITSVKIEGVDHEFTTIPEVSEDVTDVVLNLKEVLLRMHTNETKTLRIEAEGPKEVKAG
DIIADADVEILNPGHHICTISEGGKLRMELTCRRGRGYVPANSNKVAGAPIGTIPIDSLF
SPTRKVNYQVTNARVGQVTDFDKLSLEVWTDGSVSPQDAVAYAAKIIKEQLTVFVNFDET
EEPVIAEAPKEEAKLNENLFRSVDELELSVRSANCLQQANIKTIGDLVQRTEAEMLKTKN
FGRKSLKEIKEILAEMGLSLGMKLENWPPKQAPAPAAPKV
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggcagatacgttcgttgcgaagaactggcgtgacctcatcaagccgcgccgcatggaa
gtggaccaggacagcctgacgcccacctacgggaagttcgtggcggagccgctggagcgt
ggtttcggcaccaccctgggcaactcgctgcgccgcgtgctcctgtcgtcgctgcagggc
gcggccatcacctcggtgaagatcgagggcgtggaccacgagttcaccaccatccccgag
gtgtccgaggacgtcacggacgtcgtgctgaacctgaaggaagtcctccttcggatgcac
acgaacgagacgaagacgctgcgcatcgaggcggagggccccaaggaggtcaaggcgggt
gacatcatcgccgacgccgacgtggagatcctcaaccccggtcaccacatctgcaccatc
tccgagggtggcaagctccgcatggagctgacgtgccgccgcggccgtggctacgtcccg
gccaactccaacaaggtggcgggtgcgcccatcgggaccatccccatcgactcgctgttc
tcgcccacccgcaaggtgaactaccaggtcaccaacgcgcgcgtcggtcaggtcaccgac
ttcgacaagctgtcgctcgaggtctggacggacggctccgtgtcgcctcaggacgcggtg
gcgtacgcggcgaagatcatcaaggagcagctgaccgtcttcgtgaacttcgacgagacc
gaggagccggtcatcgccgaggcgccgaaggaagaggcgaagctcaacgagaacctgttc
cgctcggtggatgagctggagctgtcggttcgttcggccaactgcctgcagcaggcgaac
atcaagaccatcggcgacctggtgcagcgcaccgaggccgagatgctcaagacgaagaac
ttcggccgcaagtcgctcaaggagatcaaggagatcctggcggagatgggcctgtcgctc
ggcatgaagctggagaactggccgccgaagcaggcgccggccccggccgctccgaaggtg
tag
DBGET
integrated database retrieval system
