Myxococcus stipitatus: MYSTI_04978
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Entry
MYSTI_04978 CDS
T02436
Name
(GenBank) fatty oxidation complex subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
msd
Myxococcus stipitatus
Pathway
msd00071
Fatty acid degradation
msd00280
Valine, leucine and isoleucine degradation
msd00310
Lysine degradation
msd00362
Benzoate degradation
msd00380
Tryptophan metabolism
msd00410
beta-Alanine metabolism
msd00640
Propanoate metabolism
msd00650
Butanoate metabolism
msd00907
Pinene, camphor and geraniol degradation
msd00930
Caprolactam degradation
msd01100
Metabolic pathways
msd01110
Biosynthesis of secondary metabolites
msd01120
Microbial metabolism in diverse environments
msd01200
Carbon metabolism
msd01212
Fatty acid metabolism
Module
msd_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
msd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
MYSTI_04978
00650 Butanoate metabolism
MYSTI_04978
09103 Lipid metabolism
00071 Fatty acid degradation
MYSTI_04978
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
MYSTI_04978
00310 Lysine degradation
MYSTI_04978
00380 Tryptophan metabolism
MYSTI_04978
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
MYSTI_04978
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
MYSTI_04978
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
MYSTI_04978
00930 Caprolactam degradation
MYSTI_04978
Enzymes [BR:
msd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
MYSTI_04978
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
MYSTI_04978
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
MYSTI_04978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
NAD_binding_2
UDPG_MGDP_dh_N
DAO
NAD_Gly3P_dh_N
F420_oxidored
2-Hacid_dh_C
ApbA
Sacchrp_dh_NADP
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
AGC46266
UniProt:
L7UBI7
LinkDB
All DBs
Position
6403250..6405427
Genome browser
AA seq
725 aa
AA seq
DB search
MSEQNTIRWEQDADGIVLLTMDDPNQSANTMNAAYIASMRATVNRLAQEKATITGVILTS
AKKTFFAGGDLKDLLRIRKEDAKQAFEFGQEIKAQLRVLETLGKPVVAAINGAALGGGLE
IALACHRRIVADVKGAQIGLPEVTLGLLPGGGGVVRTVRMLGIVDAMMKVLLQGQRYRPK
EAQEVGLVHEVVDSVEALLPAAKAWVKANPSAQQPWDAKGYKIPGGTPSSPGLATNLPAF
PANLRKQIKGTNLPAPRAIMAVAVESTQVDVDTAFTIESRYFTELVTGQVAKNMIQAFFF
DMQHINSGGGRPKGHPQHTAKKVGVLGAGMMGAGIAYVCAKAGIDVVLKDVSQAAADKGK
QYSVKLVEKGVQKGKTTKEKGDALLARITPTSDPAALQGCDLVIEAVFESVELKHKVFQE
VQGVVAPDAVLASNTSTLPITQLAEGVKRSEDFVGMHFFSPVDKMPLLELIAGKKTSDAT
LAKAIDIAVQIGKTPIVVNDSRGFFTSRVIGTFLNEAIAMVGEGLAPASIEQAGLQAGYP
AAPLSLMDELTLTLPRKIRQETKAAVEASGQTWVEHGSATVIDALIDQHGRKGRSTGGGF
YDYADDKRTGLWPGLAQHFTRAGHTIPFEDMKDRMLFAEAIDTVRCFDEGVLRSAADANI
GSILGIGFPPWTGGVVQFINGYEGPTGTSLKGFILRARELAERYGKHFLPPASLVEKAER
GELLK
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcagaacaccatccgctgggaacaggatgccgacggcatcgtcctcttgacg
atggacgacccgaaccagtccgccaacacgatgaacgccgcgtacatcgcgtccatgcgt
gcgaccgtgaaccggctggcccaggagaaggccaccatcaccggcgtcatcctcacgtcc
gccaagaagaccttcttcgccggcggagacctcaaggacctgttgcgcatccgcaaggag
gacgcgaagcaggccttcgagttcgggcaggagatcaaggcgcagctgcgcgtgctggag
acgctgggcaagcccgtcgtcgccgccatcaacggcgcggcgctgggcggcgggctggag
attgccctcgcgtgtcaccgccgcatcgtcgccgacgtgaagggcgcgcagattggcctg
ccggaagtgacgctgggcctgttgcccggtggcggcggcgtggtgcgcaccgtgcgcatg
ctgggcatcgtggacgcgatgatgaaggtgctgctccagggccagcgctaccgtcccaag
gaggcccaggaggtgggcctggtgcatgaggtggtggactccgtggaggcgctcctgccc
gcggccaaggcgtgggtgaaggcgaacccgagcgcgcagcagccgtgggacgccaagggc
tacaagattccgggcggcacgccgtcctcgcccggcctggcgaccaacctgcccgccttc
cccgccaacctgcgcaagcagatcaagggcacgaacctgcccgccccgcgcgccatcatg
gccgtggcggtggagagcacgcaggtggacgtggacaccgcgttcaccatcgagtcgcgc
tacttcaccgagctcgtcacgggccaggtcgcgaagaacatgattcaggcgttcttcttc
gacatgcagcacatcaactccggcggcggccgccccaagggccatccgcagcacaccgcg
aagaaggtgggcgtgctgggcgcggggatgatgggcgcgggcatcgcctacgtgtgcgcc
aaagcgggcatcgacgtggtgctcaaggacgtgagccaggccgccgcggacaagggcaag
cagtactccgtcaagctcgtggagaagggcgtccagaagggcaagacgacgaaggagaag
ggcgacgcgctgctggcgcgaatcacccccacctcggacccggcggcgctccagggctgc
gacctggtcatcgaggccgtcttcgagagcgtggagctcaagcacaaggtcttccaggag
gtccagggcgtcgtggccccggacgcggtgctggcgtccaacacctccacgctgcccatc
acccagctggcggaaggggtgaagcgctcggaggacttcgtgggcatgcacttcttctcc
cccgtggacaagatgccgctgctggagctcatcgcgggcaagaagacgagcgacgccacg
ctggcgaaggccatcgacatcgcggtgcagatcggcaagacgcccatcgtcgtcaatgac
agccggggcttcttcaccagccgcgtcatcggcacgttcctcaacgaggccatcgccatg
gtgggcgagggcctggcccccgcgtccatcgagcaggcgggactccaggcgggctacccc
gccgcgccgctgtccctcatggacgagctcacgctgacgctgccgcgcaagatccgccag
gagacgaaggcggccgtggaggcctccggccagacgtgggtggagcacggcagcgccacg
gtcatcgacgcgctgattgaccaacatgggcgcaagggccgctccaccggtggtggcttc
tacgactacgcggacgacaagcgcacgggcttgtggccgggcctcgcccagcacttcacc
cgcgcgggccacaccatccccttcgaggacatgaaggaccggatgctattcgccgaggcc
atcgacacggtgcgctgcttcgacgagggcgtgctgcgctcggcggcggacgccaacatc
ggctccatcctgggcatcggcttcccaccctggacgggcggcgtggtccagttcatcaac
ggctatgagggccccaccggcaccagcctgaagggcttcatcctccgggcgcgagagctg
gcggagcgctatggcaagcacttcctgccccccgcgtcgctcgtcgagaaggccgagcga
ggcgagctgctgaagtag
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