Myxococcus stipitatus: MYSTI_06229
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Entry
MYSTI_06229 CDS
T02436
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
msd
Myxococcus stipitatus
Pathway
msd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYSTI_06229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msd03021
]
MYSTI_06229
03019 Messenger RNA biogenesis [BR:
msd03019
]
MYSTI_06229
Transcription machinery [BR:
msd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MYSTI_06229
Messenger RNA biogenesis [BR:
msd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MYSTI_06229
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
Spore_III_AA
NACHT
S1CSD-TOTE-2
AAA_22
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
AGC47502
UniProt:
L7UIX7
LinkDB
All DBs
Position
complement(8075020..8076651)
Genome browser
AA seq
543 aa
AA seq
DB search
MRKARTSREKAADVAAPVEADDKPRRKRAAAKTADREENEKPTRSRRTRRDEDLGAEAEP
ESAEASAEPPRPVLTPISRPVRDDDLQEARISGEDTSPAASLPAAPEAPEAPAITEVSRD
GAPMQVIKLNDLKRMKITDLSKMAHDVGIEGYQGLKKQDLIFALLGGIADKRFEVHAEGV
MELLSDGFGFLRSADSDYQPSPDDIYVSPSQVRRFNLRPGDTVTGPIRQPREGERFFALQ
KVDKVNFTDPMSDAARERILFDNLTPLYPTRKLKLEHESSEMTTRIIDMFCPIGLGQRCL
IVAPPKAGKTVLLQNIAHAISRNHPDVYLIVLLVDERPEEVTDMERSVRGEVVSSTFDEP
ATRHVQVAEMVIDKAKRLVEQKYDVCILLDSITRLARAYNTVVPASGKILSGGVDANALH
KPKRFFGAARNIEEGGSLTIIGTALIDTGSRMDEVIFEEFKGTGNSEIVLDRKLMEKRIF
PTLDINKSGTRKEELLLSPGDLVRITALRQVLHPFTPIDAMEFVLKHMRPTASNADFLGS
MNR
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaagcccgtacttcgagagagaaggccgccgacgtcgccgcacccgtcgaggcc
gacgacaagccccgtcgcaagcgcgcggcggcgaagaccgccgatagggaagaaaacgag
aagccgacccgctcacgccggacccggcgcgacgaggacctgggggcagaggccgagccg
gagtccgccgaggcgagcgccgagcccccccgtccggtgctgacgcccatctcgcgtccc
gtccgggatgacgacctccaggaggcgcgcatctccggtgaggacacgtcgccggccgcg
tccctgccggccgcgccggaggcccccgaggcccccgccatcaccgaggtgagccgcgat
ggcgccccgatgcaggtcatcaagctcaatgacctgaagcggatgaagatcacggacctg
tccaagatggcccacgacgtgggcatcgagggctaccagggtctgaagaagcaggacctc
atcttcgcgctcctcggcggcatcgcggacaagcgcttcgaggtccacgccgaaggcgtg
atggagctgctcagcgacggcttcggcttcctgcgcagcgcggacagcgactaccagccc
agcccggacgacatctacgtgtccccgtcgcaggtgcgccgcttcaacctgcggcccggc
gacacggtgacgggccccatccgccagccccgcgagggcgagcgcttcttcgcgctccag
aaggtggacaaggtcaacttcacggacccgatgtcggacgcggcgcgcgagcgcatcctg
ttcgacaacctcacgccgctctacccgacgcgcaagctcaagctggagcatgagtcgtcg
gagatgacgacgcgcatcatcgacatgttctgccccatcggtctgggacagcgctgcctc
atcgtggcgccgcccaaggccggcaagacggtgctcctgcagaacatcgcgcacgccatc
agccgcaaccacccggacgtctacctcatcgtgctgctcgtcgacgagcgccccgaggaa
gtgacggacatggagcgcagcgtgcgcggcgaggtggtgtcctccaccttcgacgagccc
gccacgcgccacgtgcaggtcgcggagatggtcatcgacaaggccaagcgcctggtcgag
cagaagtacgacgtctgcatcctgctggactcgattacgcgtctggcgcgcgcctacaac
acggtggtgccggcctccggaaagattctctccggcggtgtggacgccaacgcgctgcac
aagcccaagcgcttcttcggcgccgcgcgcaacatcgaggagggcgggtcgctgaccatc
atcggcaccgcgctcatcgacaccggcagccgcatggacgaggtcatcttcgaggagttc
aagggcacgggtaactccgaaatcgtcctggaccgcaagctgatggagaagcgcatcttc
ccgacgctggacatcaacaagtccggtacgcgcaaggaagagctgctcctgtcgccgggc
gacctggtgcgcatcaccgcgctgcggcaggtgctccacccgttcacccccattgacgcc
atggagttcgtgcttaaacacatgcgtccgacggcttcgaacgccgacttcctcggctcg
atgaaccgatag
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