Myxococcus stipitatus: MYSTI_06448
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Entry
MYSTI_06448 CDS
T02436
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
msd
Myxococcus stipitatus
Pathway
msd03030
DNA replication
msd03430
Mismatch repair
msd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MYSTI_06448
03430 Mismatch repair
MYSTI_06448
03440 Homologous recombination
MYSTI_06448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msd03032
]
MYSTI_06448
03400 DNA repair and recombination proteins [BR:
msd03400
]
MYSTI_06448
Enzymes [BR:
msd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MYSTI_06448
DNA replication proteins [BR:
msd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MYSTI_06448
DNA repair and recombination proteins [BR:
msd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MYSTI_06448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AGC47721
UniProt:
L7UFJ6
LinkDB
All DBs
Position
complement(8344779..8348330)
Genome browser
AA seq
1183 aa
AA seq
DB search
MSFTHLHLHTLYSLLDGAIRMKDLIKTVKEKGMTSVAVTDHGNMFGAIDFYKKAKDAGIK
PILGMEAYVAGPKGREDRSEKVSHHLILVAKNAEGYANLRYLSSMAYMQGFYYHPRIDKK
VLAEHSKGLFALTACLGGEVTSACFRGDMDHARRAAQEYKDIFDPGHFFLEVQSNGMPEQ
DKANENLMQLSRDLDIPLCATADAHYIKREDARAHELLMCIASGKTLADNKRLKHATDKL
YVTSPTEMLEFFKDTPEAVHNTQRIAEQCNLELKLGKPMLPTFKVPDSHTPDSFMSELAY
EGLRERFIELGATVTYPIDREVYQARLTLELGVIQKMGFSGYFLIVQDFINWAKKMGIPV
GPGRGSGAGSLVAYALRITDVDPIPYNLLFERFLNPERVSMPDFDIDFCQDRRDEVIQYV
GRKYGEMNVGQIITFGSLKAKSVLRDVCRVFALPFSEGDRIAKLVPEVLNITLKEAIEME
PRLKEMMEKPSNIGDVEGKPVTTKDVLEIALALEGLHRQPGMHAAGVVIADKPLWEFVPV
YQPPGEKTLITQFAKDEVEAAGLVKFDFLGLKTLTVIQHGLDLVKRNHGKDIPRHEIPLN
DDKVWELMAKGDTAGVFQMESSGFTEMVVKLKPSCFEDVIAAGALYRPGPLDSGMVDVFI
NRKHGREKVSYPHPALEPVLKDTYGVIVYQEQVMQISQVLGGYTLGRADLLRRAMGKKKA
EVMQAERAGFLEGCAKNNVDLKVAGEIFDLMEKFAEYGFNKSHSAAYGLVTIHTAWLKAH
YPCEFMAALLSSEKDNTDKVVKHIGEARESGLQVLPPDVNQSDLQFGAVDGKIRFGLGGI
KGVGEGAIESILDARKDGHFKSLFDFCERVDSRRVNRKVLEALVKAGSFDFEKRPRRQIF
DTIEKAMNRGSASQKDKAAGQSSLFGMLAGPAAGGAGLKDDYVVVEEWSEKERLALEKEA
IGFYVSGHPLHQYDKELKRYAKPITAVQRARKDDKLTVAGVVTVLRERPTKTGKRMAWVT
IEDLSGSIELVCFPGKEGTRSVMGANGKWTKQGPKPGFENWEHLLKSDDPILVTGTVQIS
QRDEDSPTPELIVDDIQSLKEVREKRTKRLELRVPADLLTEDRVAKLNELAKKYAGATPV
AVSVLFPGEAEALIGNTSIKVQVHDDLLLAVDRLFGMKVVEFG
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttacccacctgcaccttcacaccctctattccctgctcgacggggccatccgg
atgaaggacctcatcaagacggtgaaggagaaggggatgacgagtgtcgccgtgacggac
cacggcaacatgttcggcgccatcgacttctacaagaaggcgaaggacgcgggcatcaag
cccatcctcggcatggaggcgtacgtcgcggggcccaaggggcgtgaggaccgctccgag
aaggtctcccaccacctcatcctggtggcgaagaacgcggagggctacgccaacctgcgc
tacctctcgtcgatggcgtacatgcagggcttctactaccacccgcgcatcgacaagaag
gtgctcgccgagcacagcaagggcctcttcgcgctcaccgcctgcctgggtggcgaggtg
acgagcgcctgcttccgcggcgacatggaccacgcccgccgcgcggcccaggagtacaag
gacatcttcgaccccgggcacttcttcctggaggtgcagtccaacgggatgccggagcag
gacaaggcgaacgagaacctgatgcagctgtcgcgggacttggacatcccgctgtgcgcc
acggcggacgcgcactacatcaagcgcgaggacgcgcgcgcgcacgagctgctcatgtgc
atcgccagcggcaagacgctggcggacaacaagcgcctgaagcacgccacggacaagctc
tacgtcaccagccccacggagatgctggagttcttcaaggacacgcccgaggcggtccac
aacacccagcgcatcgcggagcagtgcaacctggagctgaagctgggcaagcccatgctt
cccaccttcaaggtgcccgacagccacacgccggacagcttcatgtcggagctggcctac
gaggggcttcgcgagcgcttcatcgagctcggggccaccgtcacctatcccatcgaccgc
gaggtgtaccaggcgcgcctgacgctggagctgggcgtcatccagaagatggggttcagc
ggctacttcctcatcgtccaggacttcatcaactgggcgaagaagatgggcatccccgtg
ggcccgggccgtggctccggcgccggcagcctggtggcgtacgcgctgcgaatcacggac
gtggaccccatcccgtacaacctcctcttcgagcgcttcctgaatccggagcgcgtgtcg
atgcccgacttcgatatcgacttctgccaggaccggcgggacgaggtcatccagtacgtg
ggccgcaagtacggcgagatgaacgtggggcagatcatcacgttcggctcgctgaaggcc
aagagcgtgctgcgcgacgtgtgccgcgtgttcgcgctgccgttcagcgaaggcgaccgc
atcgcgaagctggtgccggaggtgctcaacatcaccttgaaggaggccatcgagatggag
cctcgcctcaaggagatgatggagaagccgtccaacatcggcgacgtggagggcaagccc
gtcaccacgaaggacgtgctcgaaatcgcgctggcgctggaggggttgcaccgtcagccg
ggcatgcacgcggccggtgtcgtgattgcagacaagccgctgtgggagttcgtgcccgtc
taccagccgccgggtgagaagacgctcatcacccagttcgcgaaggacgaggtggaggcg
gcgggcctggtgaagttcgacttcctcggcctgaagacgctcacggtgattcagcacggg
ctggatctggtgaagcgcaaccacggcaaggacatcccgcggcacgagattccgctgaac
gacgacaaggtctgggagctgatggccaagggcgacacggccggcgtcttccagatggag
tcgagtggcttcacggaaatggtcgtgaagctcaagccgtcctgcttcgaagacgtcatc
gccgccggcgcgctctaccgcccgggtccgctggactccggcatggtggacgtgttcatc
aaccgcaagcacgggcgcgagaaggtgtcgtatccgcaccccgcgctggagccggtgctc
aaggacacgtacggcgtcatcgtgtaccaggagcaggtgatgcagatttcgcaggtcctg
gggggctacaccctgggccgcgcagacctgcttcgccgcgcgatgggcaagaagaaggcc
gaggtcatgcaggccgagcgggccggcttcctcgagggctgcgcgaagaacaacgtcgac
ctgaaggtcgccggtgaaatcttcgacttgatggagaagttcgcggagtacggcttcaac
aagagccactcggcggcgtacggcctggtcacgattcacacggcctggctgaaggcgcat
tacccgtgcgagttcatggcggcccttctctccagcgagaaggacaacacggacaaggtg
gtgaagcacatcggtgaggcgcgcgagtcgggcctccaggtgttgccgccggacgtgaat
cagtcggacctgcagttcggcgcggtggacgggaagattcgcttcgggttgggcggcatc
aagggcgtgggtgagggcgccatcgagtccatcctggatgcgcgcaaggacggacacttc
aagagcctgttcgacttctgcgagcgggtggacagccgccgggtgaaccggaaggtgttg
gaagcgctggtgaaggcgggctcgttcgacttcgagaagcggccgcgccggcagattttc
gacaccatcgagaaggcgatgaaccggggctcggccagccagaaggacaaggcggcgggg
cagagctcgttgttcgggatgttggcgggtccggcggcgggtggggcggggctgaaggac
gactacgtcgtggtggaggagtggtcggagaaggagcggctggcgctggagaaggaggcc
atcggcttctacgtgtccggccatccgctgcatcagtacgacaaggagctcaagcgctac
gcgaagccgattacggcggtgcagcgtgcgcgcaaggacgacaagctcacggtggcgggg
gtcgtcacggtgttgcgcgagcggcccacgaagacgggcaagcgcatggcgtgggtgacg
atcgaagacctgtcgggctccatcgagctggtgtgcttcccgggcaaggaggggacgcgc
agcgtgatgggggcgaacgggaagtggacgaagcaggggcccaagccggggttcgagaac
tgggagcacctgctgaagtcggacgacccgattctggtgacggggacggtgcagatcagc
cagcgcgacgaggactcgcccacgccggagctcatcgtggacgacatccagagcctgaag
gaggtgcgcgagaagcgcacgaagcggctggagctgcgcgtgccagcggacctcttgacg
gaggaccgggtggcgaagctgaacgagctggcgaagaagtacgcgggggccacgcccgtg
gcggtcagcgtgctgttccccggcgaggccgaggcgctcattggaaacacctccatcaag
gtgcaggtgcatgacgacctgctgctcgcggtggaccgcctgttcggcatgaaggtggtg
gagttcggctga
DBGET
integrated database retrieval system
