Myxococcus stipitatus: MYSTI_06484
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Entry
MYSTI_06484 CDS
T02436
Name
(GenBank) RNA polymerase sigma-E factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
msd
Myxococcus stipitatus
Brite
KEGG Orthology (KO) [BR:
msd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msd03021
]
MYSTI_06484
Transcription machinery [BR:
msd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MYSTI_06484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AGC47757
UniProt:
L7UJR1
LinkDB
All DBs
Position
complement(8387217..8388329)
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AA seq
370 aa
AA seq
DB search
MASGGKRTKGTSSRPKSKRAAGSAPPRAEEVDAQSEDAGAESQVDPDALEPDEAELVEVE
PEEDAPRPAPTKALARAGESGLSNRDPLQAYMAEVQRHPLLSREEELALSRQYRDTQDVR
TAYRLVASNLRLVVKLAHEYHRNPLSLLDLVQEGNIGLMQAVKKYDPERGVKLSSYAAWW
IRAYILRYIMDNWKMVKLGTTEAQRKLFFKLRQEQEKLIAQGFEPSPKLLAERLNVTEQD
VVEMDQRLGHDEVSIDAPLGGDDEGSRATRADRYLPSGAVPADERLGAEQLKALFREKLA
EFSRSLEGKERYIFEHRLTADEPLTLQDIGDKYGVSRERARQIEAALIQRMREFMREHIP
DFDLVATPKA
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtggagggaaaagaaccaaaggaacgtcttcccggcccaagtcgaagcgggcg
gcggggagcgcgcctccccgtgcggaagaggttgacgcccagtcagaggacgcgggtgcg
gagtcgcaggtggacccggacgccctggagccggacgaggcggagctggtggaagtggag
ccggaggaggacgccccccggccggcgcccacgaaggccctggcccgggcgggtgagtcc
gggctgagcaaccgggaccccctccaggcctacatggcggaggtgcagcgccaccccctg
ctgtcgcgcgaggaggagctggcgctgtcgcgtcagtaccgcgacacccaggatgtgcgg
accgcgtaccggctggtggcctccaacctgcggctggtggtgaagctggcccacgagtac
caccgcaacccgctgtccctgctggacctggtccaggagggcaacatcgggttgatgcag
gcggtgaagaagtacgaccccgagcgcggcgtgaagctgagcagctacgcggcctggtgg
attcgggcgtacatccttcgctacatcatggacaactggaagatggtgaagctggggacg
acggaggcccagcggaagctcttcttcaagctgcgccaggagcaggagaagctcatcgcc
cagggcttcgagcccagccccaagctgctcgcggagcgcctcaacgtcaccgagcaggac
gtggtggagatggaccagcggctgggccacgacgaggtctccatcgacgcgccgctgggc
ggggacgacgaaggctcccgggccacccgcgcggaccgctacctgccgtcgggcgccgtc
cccgccgatgagcggctgggggccgagcagctcaaggccctcttccgggagaagctggcg
gagttctcccggtcgctggagggcaaggagcgctacatcttcgagcaccgcctcaccgcg
gacgagcccctgacgctccaggacatcggcgacaagtacggcgtcagccgcgagcgcgcg
cgtcaaatcgaggccgcgctcatccagcgcatgcgcgagttcatgcgcgaacacatcccg
gacttcgacctggtggcgacgccgaaggcctga
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integrated database retrieval system
