Myxococcus stipitatus: MYSTI_06589
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Entry
MYSTI_06589 CDS
T02436
Name
(GenBank) putative ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
msd
Myxococcus stipitatus
Brite
KEGG Orthology (KO) [BR:
msd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msd03016
]
MYSTI_06589
Enzymes [BR:
msd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MYSTI_06589
Transfer RNA biogenesis [BR:
msd03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MYSTI_06589
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AGC47862
UniProt:
L7UK22
LinkDB
All DBs
Position
8511657..8512826
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AA seq
389 aa
AA seq
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MPTYPQGAVDVVDTEGAQSALGKLEQARELAVDLEADSMHAFRARLCFLQVATDSDVFLL
DTLQPGVEARLLAPLMGEPGRTKYFHAAQGDLQFLAEAGVRVRGLFDTHRAATLLGWPKV
GLADIAREKLGVELPKEHQQSDFSLRPLPPGMRDYIANDVRYLCELGRQVREATREAGIL
EEVELDCERLCDEAVARPDVGADFKPKLPRSGLSPAQMTLANAIAHALHKKRLEWAEKEN
VPMGRMLSNMAIADIATRLPSSPRDLARAAGVRGSFVRTHGDEVLAILREQQEKARNGEL
QPERENKGPKDSNRRKREDALKAFRVEKATERKVTPSVILTNPLMDALLSQPPRDLEELG
RVPYLGDKRLKLYGPALLELLAAFPVVGG
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgccaacctacccacagggtgccgtggacgtggtcgataccgagggggcccagagcgct
ctcggaaagctggagcaggctcgggagctggccgtggacctggaggccgactccatgcac
gccttccgagcccggctgtgcttcctccaggtcgccaccgacagcgacgtctttctcctc
gatacgctccagcccggcgtggaagcccggctgctcgccccgctgatgggggagccaggc
cgaaccaagtacttccacgcggcccagggggacttgcagttcctggcggaagcgggggtg
cgggtgcggggtctgttcgatacccaccgggccgccaccctgctgggctggccgaaggtg
ggcctggcggatatcgcccgggagaagctgggcgtggagctgcccaaggagcaccagcag
tcggacttctccctgcggcccctgcctcccggcatgcgcgactacatcgccaacgacgtg
cgctacctctgtgagctggggcgccaggtgcgcgaggccacgcgcgaggccggcatcctg
gaggaggtggagctggactgcgagcggctgtgtgacgaggccgtggcgcgtcccgacgtg
ggcgcggacttcaagcccaagctgccccgctccgggctgtccccggcgcagatgacgctg
gcgaacgccatcgcccacgcgctgcacaagaagcggctggagtgggcggagaaggagaac
gtgcccatggggcgcatgctctccaacatggccatcgcggacatcgccacgcggctgccc
tcctcgccccgggacctggcgcgcgcggccggcgtgcgaggctccttcgtgcgcacgcac
ggcgacgaggtcctcgccatcctccgcgagcagcaggagaaggcgcgcaacggagagctg
cagccggagcgcgagaacaagggccccaaggactccaaccgccgcaagcgcgaggacgcc
ctcaaggccttccgcgtggagaaggcgaccgagcgcaaggtgacgcccagcgtgattctc
accaatccgctgatggacgcgctgctgtcgcagccaccgcgggacctggaggagctgggc
cgggtgccatacctgggtgacaagcgactgaagctctacggacccgccctcctcgagctg
ctcgccgcgttccccgtcgtcggaggctga
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