Myxococcus stipitatus: MYSTI_07266
Help
Entry
MYSTI_07266 CDS
T02436
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
msd
Myxococcus stipitatus
Brite
KEGG Orthology (KO) [BR:
msd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msd03016
]
MYSTI_07266
Enzymes [BR:
msd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
MYSTI_07266
Transfer RNA biogenesis [BR:
msd03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
MYSTI_07266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Acb1
Motif
Other DBs
NCBI-ProteinID:
AGC48538
UniProt:
L7UKI9
LinkDB
All DBs
Position
9323508..9324062
Genome browser
AA seq
184 aa
AA seq
DB search
MRLFTAVTLGADIEARVTTAMKPLRALASHARFVRVEGLHLTLVFLGEVESARLPAIREA
LASVGPRHAPFTLSVGGGGTFGSPTHPRVLWADVQGDTAALEALQADTAAQLRPLGFEPD
FHEYAPHLTLARSKESRGEPAFLPCVEALKNQQLGQGRVDRLILFESQGPRYLTVAEVPL
TRAG
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgagactgttcaccgccgtcacgctgggcgccgacatcgaggcccgagtcaccaccgcg
atgaagccgctgcgcgcgctcgcgagccacgcccgcttcgtccgcgtggagggcctgcac
ctcacgctggtgttcctgggcgaggtggagtccgcgcggctgcccgccatccgtgaggcc
ctcgcgagcgtggggcctcggcatgcgccgttcacgttgtcggtggggggcggcggcacc
ttcggctcacccacgcaccctcgagtgctctgggccgacgtccagggcgacacagcggcg
ctcgaggcgctgcaagccgatacggccgcgcaactgcgccccctgggcttcgagcccgac
ttccacgagtacgcgccgcacctgacgctggcgcggagcaaggagtcgcgcggcgagcca
gcgttcctcccgtgcgtggaggcgctgaagaaccagcagctgggccaggggcgagtggac
cggctcatcctcttcgagagccaggggcctcggtacctcaccgtggccgaggtgcccttg
acccgcgcgggctga
DBGET
integrated database retrieval system
