Methanosarcina sediminis: ACSAZK_00085
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Entry
ACSAZK_00085 CDS
T11832
Name
(GenBank) AAA domain-containing protein
Organism
msds Methanosarcina sediminis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
AAA_30
Trypan_PARP
UvrD-helicase
PhoH
Viral_helicase1
UvrD_C_2
DEAD
ResIII
NAT10_TcmA_helicase
AAA_25
nSTAND3
AAA_22
AAA
AAA_16
AAA_24
T2SSE
Motif
Other DBs
NCBI-ProteinID:
XYY85682
LinkDB
All DBs
Position
21310..25659
Genome browser
AA seq
1449 aa
AA seq
DB search
MIKHRLSPSLIARFFYHNCERYLRYHSTPLQERARSGIPEVRPDQSPATKALLEAGNRWE
ELVVLEKLKDNLLVPEGEGVLHERAHSVKESLEIFRNLKKGDTVYQPTLLVPPRFYQKYN
LSPELCRFSACRPDLLRVVEKEPKKPTDLTDPTDPTNSANMDNSDKPGESGELCLQVIDV
KASDELSSSHRIQATLYALMLKEVLEENGIDMQVDMSRAGIWLYGQDEPELFNLGFNIRI
IEEFLRYRLPKILAEPLKDVPWHVYNRCELCDFYRHCREEAEKCDSVSLIPYLSVSGREY
LREAEWDSRTSINTLSELEAFLEAGGSEGSKDTKGVEGSEGAEGTENVDEILDKCGSLRG
KGEFLRNTLRALKEKEVVVNRGVSLPLPKNEDVSLFLTLQRDPVSGKIYSAGFRRFKGKA
VYGSPVNERVYVAESPDHCEEIQRRFLLDLFDELKILHDYNEAFKEANESNEVTGNGSTG
NEANKTNEAAANEPTESDETLKWKEQKSLQTYVYDSYEASLFRELLREAVKIPELAPVAL
ELLFYYQDPSLFGEKQHPFSKVSFPLVVLTEEIRKLVCLPIPFSLRLPEVTEALPKADFD
FKLDPGDLFWFEHGNALKSDAIAMAWERKKVEAVGWIEKELSMRLLAASSVLDGLREKTR
DSLVRWPPKFRIPASRRYNYPEVSRMVFITRYESYLRNQEIRERRSLPFSERVKEGISIP
VQYLEQNLWKVNCDLDTSLFEQNENFGYLLVPKGADGEKAQLSFEDYKYRTNLQNPGRSK
VCFAMVNKKVENEKTGKIMGFFLEVYYNEDQLGFSSNDARAASDPSSKPVSKQSFFKTGD
EAVLHPRFTDFSSERIISRLTELDEQLEHDFIRLLRDPRGFSTPIRETDSVRTAALKHAE
NSGFTPSQQKAFTHMLENRLTLIWGPPGTGKTYFLAKALLDLVRAKMEAGETIHVGITAF
THAAIENLLLRVREFAEEEGLVEGSGEGEGKEEGEGNGRKEGKGKGLEIYKLKDIKTQKA
REALKVLSEYDIQEKSTCPFLILGGTVNSFNKIKQKCDPFDILIVDEASQMKPAELALGM
SVLDEGKRLILAGDDLQLPPIIAGEYPEPEDGLPGLYDSIFSYLRLRDSSPDPGYTCQLL
ENWRMNETLSSFPAATLYGKGYRPANEGIAKQKLKLLSRGFPETTQKLEADAEPESVSEP
ESASEPEFASEPESEPKLKPEPEPKPESNPEPEPEFINWALDSEYPLSVVILENTRASIE
NEIEAELVAKLAVSLRQTLSRDDAGTPYPDSGEGDSDFWKHGLFIVSPHRAQIRTIRDEL
GKLRDWQHRPFVDTVDKTQGQEAEAVIVSYGVSDIDTAMNEAEFIYSLNRLNVSITRAKA
KCVVFLPRPLLEPPLDLLKNAGASKGLGHMLELVEFCREKGEVEEFEVELEQGVCRLTGI
RAKANRVED
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgataaaacacagactgagcccttcactaatagccagatttttttaccacaactgcgag
cgctatcttcgataccattcgacccccctgcaggaaagggcccgatccgggatcccggaa
gtcaggccggaccagagcccggctacgaaagctctcctggaggcggggaaccggtgggaa
gagcttgtggtccttgaaaaactgaaggacaatttgctggtcccggaaggcgagggggtt
cttcacgaaagggctcattccgtaaaggaaagcctggaaattttcaggaatttgaaaaag
ggggatacggtctaccagcctacacttttagttccgccccggttttatcaaaagtacaat
ttatcccctgagctgtgcaggttttcggcttgcaggcctgacctgctgcgggttgtggag
aaggagccgaagaagccgacagacctaacggaccctacagacccgacaaattcggcgaat
atggataattcggacaagccgggcgagtccggtgagctctgcctccaggtgatcgatgta
aaggccagcgacgaactgagttcgagccaccgtatccaggctacgttatatgctctgatg
ctgaaagaggtgctggaggaaaacggcattgatatgcaggtggacatgagccgggcaggc
atctggctttacgggcaggacgagccggaactgttcaacctgggtttcaatatcaggatt
atcgaggaatttttgaggtaccgcctgccaaaaatcctagcagaacctctcaaagatgtg
ccatggcacgtatacaaccgctgcgagttatgtgatttctacaggcactgcagggaagag
gctgaaaaatgcgattcggtgtcccttatcccttacctttcggtcagcgggagggagtac
ctcagggaggcggaatgggacagcaggacgtcgataaataccctgtccgagctggaggct
tttcttgaggcagggggaagcgagggaagcaaggacacaaaaggtgtcgaaggctctgaa
ggtgccgagggaaccgaaaatgttgatgagatcctggataagtgcggctctttgcgcggg
aaaggggaatttttgcgaaataccctccgggctctgaaggaaaaggaggtcgtggttaac
aggggagtttcccttccgctgcctaaaaatgaggacgtaagcctttttctgaccctccag
agggaccctgtttcgggcaagatttactcggcgggttttaggcgctttaaggggaaagca
gtttacggaagtccggtgaacgaaagggtttacgtggctgaaagccctgaccattgtgaa
gagatacagaggagattcctgctggacttatttgacgagctgaaaatcctgcatgattat
aacgaagcttttaaagaagccaatgaatccaatgaagtcaccggtaatggatccactggc
aatgaagctaataaaactaatgaagccgctgcaaacgaacccaccgaatccgatgaaacc
ctgaaatggaaggaacaaaagtccctgcagacatacgtttatgacagctacgaagcctct
ttgttcagggaactcctccgggaagcggtaaaaatcccggaactggcacccgttgccctt
gaactcttattctactatcaggacccttcgctgttcggggaaaagcagcatcctttttca
aaggtgtcgttcccgcttgttgtgctgaccgaggagatccggaagctggtatgtttgccg
attcccttttccctccggcttcccgaggttacggaggctttgccgaaagccgatttcgat
tttaagcttgaccctggggacctgttctggttcgagcacggcaacgcgcttaagagcgat
gcgattgcgatggcatgggagaggaagaaggttgaagcggtcggctggattgaaaaggaa
ctttcgatgcggctccttgcagcgagcagcgtccttgacgggctccgggaaaaaacccgg
gactccctggtcaggtggcctcccaaattccggatcccggcgtcccggaggtacaactac
ccggaagtttccaggatggtctttattacccgctacgagtcttacctgagaaaccaggag
attcgggagaggcgaagccttcctttttcggaaagggtgaaggaagggatcagcatccct
gtccagtacctggaacagaacctctggaaagtcaactgcgacctggacacgagcctcttc
gaacaaaacgaaaacttcggctacctcctggtcccgaagggagctgacggggaaaaagcc
cagctcagctttgaagattacaaataccggaccaatctgcaaaaccccggcaggagcaaa
gtctgctttgcaatggtcaacaagaaggtcgaaaacgaaaaaaccgggaagataatggga
ttcttccttgaggtctattataatgaggatcagctgggtttttccagcaacgatgcccgg
gctgcttccgacccatcttccaaaccggtttccaaacagagctttttcaagacaggagac
gaggcagtccttcacccgaggttcacggacttttcctcggaaaggataatttccaggctc
accgagcttgacgagcagctggaacacgactttatccggcttttgagagacccccggggc
ttttccactccgatccgggaaaccgacagtgtccgcactgctgccctgaagcatgccgaa
aactcgggctttaccccgagccagcaaaaagccttcacccacatgctggaaaaccgcctg
acccttatctggggaccccctgggaccggaaagacctatttcctggcaaaagccctcctg
gaccttgtccgggcaaaaatggaagccggggaaacgatccatgtcgggataacggcattt
acccacgccgcaatcgaaaacctgctgctgagggtccgggaatttgcagaagaagagggg
cttgtggagggttctggagaaggagaaggaaaagaagaaggagaagggaatggaagaaaa
gaagggaaaggaaaaggacttgaaatttacaaattgaaggacataaagacccagaaagcc
cgggaggctttaaaagtcctctctgaatacgacattcaggaaaagagcacctgccccttc
ctgatcctgggagggacggtaaacagcttcaataaaataaaacagaaatgcgatcccttt
gatatcctcatcgttgacgaagcctcccagatgaagcccgcagaactggctcttggcatg
tccgtcctggacgagggaaaacggctcattcttgcaggagacgacttgcagctcccgccc
atcatagccggcgagtaccccgaacccgaagacggtttaccggggctctacgattccatc
ttctcctacctccgcctcagggacagcagcccggaccccggatacacctgccagctcctt
gaaaactggaggatgaatgagacgctctccagctttccggcagctactctctacggcaaa
ggctacaggccggcaaacgaagggatcgcaaagcagaagctcaaacttctatccaggggc
tttccggaaactactcaaaaattagaagcagacgcggaacctgaatccgtatcggaacct
gaatctgcatcggaacctgaattcgcgtcggaacctgaatctgagcccaagctcaaacct
gaacctgaacctaaacccgaatctaatccagaacccgaacctgaattcataaactgggcc
cttgactcggaataccctttaagcgtggtaattcttgaaaacacccgggcttccatagaa
aacgagatagaagccgaactggttgcaaaactcgccgtatccctgcggcagaccctgtcc
agggacgatgccggcaccccctacccggactccggggaaggagactcagatttctggaaa
cacggcctgtttatcgtaagcccccaccgagcccagatccgcacgatccgggacgagctt
ggcaaattgcgggactggcagcaccgccccttcgtggacacggtcgacaagacccagggg
caggaagccgaagccgtgatagtgagctacggggtcagcgatatcgataccgcaatgaac
gaagccgagttcatctacagcctgaaccggctgaacgtgtcgataaccagggcaaaagca
aaatgcgtggtcttcctcccgcgccccttactggaacctccccttgacctcctgaagaac
gccggggcgagcaaagggctcgggcatatgcttgagcttgtggagttttgcagggagaag
ggggaagtcgaggagttcgaggtggaacttgagcagggggtttgcaggttgacggggata
agggcgaaggctaaccgagttgaggattaa
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