Methanosarcina sediminis: ACSAZK_00280
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Entry
ACSAZK_00280 CDS
T11832
Symbol
dinB
Name
(GenBank) DNA polymerase IV
KO
K04479
DNA polymerase IV (archaeal DinB-like DNA polymerase) [EC:
2.7.7.7
]
Organism
msds Methanosarcina sediminis
Brite
KEGG Orthology (KO) [BR:
msds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msds03400
]
ACSAZK_00280 (dinB)
Enzymes [BR:
msds01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACSAZK_00280 (dinB)
DNA repair and recombination proteins [BR:
msds03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
ACSAZK_00280 (dinB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH
IMS_HHH_1
HHH_5
DUF4332
Cdd1
HHH_RS2-RL21-YNQ2
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
XYY85721
LinkDB
All DBs
Position
complement(74270..75376)
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AA seq
368 aa
AA seq
DB search
MPAPDPNKSDPKKRITFHVDMDSFFASVEVRERPELKGLPVVVGSDPKGGVGRGVVSTCS
YEAREYGVHSAMPISKAYKLCPEAVFLPVNMKLYVGVSAGVMEVLRGFAEKFQQVSVDEA
YLVPGPEVRDFEEAALYALRIKDEVRKQAGITCSVGVGPNKLLAKIASGFQKPDGMTVVR
PEDVRDFLFPMQVSKIPGIGEKTTEALKGMGISTVEELSNCNVQLLKEKFGKLGLRMKQM
ANGLDFGEVREKESVKSISRHGTFEEDTGDPVKIFGSLDSLAEAVHGSLLSNNFLYRTVT
LTVRFEDFSTYTRSKTVPIWTSDIFVIKRLIRQLLSEFLGSRKFRLVGVGVSKLRERDER
QTMITDFL
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcccccgatccgaataaaagcgatcctaaaaagcggattactttccatgtggac
atggacagcttttttgcttctgtggaggtcagggagagacccgaactgaaagggctgccc
gttgtcgtgggttccgacccgaaaggaggggtggggaggggagttgtaagcacctgttcc
tacgaggcgcgggagtacggggtccattcggcaatgccgatttcaaaggcgtataagctc
tgtcccgaagcggtttttttacccgtcaacatgaagctctatgtgggagtctcggcgggg
gtaatggaggtcctcaggggctttgcggaaaagttccagcaggtcagcgtggacgaggca
tacctggtgcccgggcccgaggtcagggattttgaggaagctgccctttatgcccttcgg
atcaaggacgaagtccggaaacaggctggaattacctgttccgtgggggtaggccccaac
aagctccttgcaaagattgcttcgggcttccagaaaccggatgggatgaccgtggtccgc
cccgaagacgtcagggattttctttttccaatgcaggtctcgaaaatcccgggcataggg
gaaaaaaccacggaagccctgaaagggatgggaatctccactgtggaagagctttcaaac
tgcaatgtccagctcctgaaggaaaagttcgggaaattgggcttgcggatgaagcagatg
gcaaacgggcttgacttcggggaggtaagggaaaaagagagcgtaaagtctatcagcagg
cacggaacctttgaggaagacaccggcgacccggtaaagatcttcggctccctggattct
cttgccgaggcagtgcacggttccctgctcagcaataacttcctctacaggaccgtaacc
ctgaccgtacgcttcgaggacttttcaacgtatacccgttcgaaaaccgtcccgatctgg
acttcggatatcttcgtgataaaaaggctgatccgccagcttctttccgagttcctgggc
agcaggaagttccggctggtgggagttggggtctcaaagcttcgggaaagggacgaaagg
cagaccatgataacggattttctgtag
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