Methanosarcina sediminis: ACSAZK_04525
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Entry
ACSAZK_04525 CDS
T11832
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
msds Methanosarcina sediminis
Pathway
msds00750
Vitamin B6 metabolism
msds01100
Metabolic pathways
msds01240
Biosynthesis of cofactors
Module
msds_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
msds00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
ACSAZK_04525 (pdxS)
Enzymes [BR:
msds01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
ACSAZK_04525 (pdxS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
DUF561
NanE
IGPS
NMO
His_biosynth
TIM
ABC_sub_bind
Motif
Other DBs
NCBI-ProteinID:
XYY86511
LinkDB
All DBs
Position
1081592..1082488
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AA seq
298 aa
AA seq
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MDFEKLRHGTELIKRGFAKMQKGGVIMDVTTPEQARIAEEAGAVAVMALQAVPADIRKEG
GVARMADPEIIQQIIDTVTIPVMAKARIGHFVEAGILEALGVDMVDESEVLTPADPYFHI
DKTDFTVPFVCGARNLGEALRRVNEGAAMIRTKGEAGTGDVSQAVKHMKQIQGEIRELAG
KTKEELIMVARDIEAPIELVLETAQMQRLPVVNFAAGGVATPADAALMMRLGADGVFVGS
GIFKAENPEKMAKAVVEAVNNYDDPAKLAEISKGIGSGMKGISVDTIPREEALQERGW
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggactttgaaaaattgagacacgggaccgaacttatcaaaaggggctttgctaagatg
cagaagggaggtgtgatcatggacgtaacgacccccgagcaggccaggatcgcagaagaa
gcaggcgcagttgctgtcatggctctgcaggcagtccccgccgacatcaggaaagaaggc
ggcgttgccaggatggcagaccccgaaatcatccagcagatcatcgataccgtcacaatc
cccgttatggcaaaagccaggatcggccacttcgtggaagccggaatccttgaagcgctt
ggcgtggacatggtagatgagtccgaagtcctgacccctgccgacccctacttccacatc
gacaagaccgacttcaccgtacccttcgtctgcggagccaggaacctcggagaagccctt
cggagagtcaacgaaggcgcagcaatgatccggaccaaaggagaagccggaacaggagac
gtcagccaggctgtcaagcacatgaaacagatccagggcgaaatccgggaacttgccgga
aagaccaaggaagaactgatcatggtcgcaagggatatcgaagcccctatcgaactcgtg
ctcgaaaccgctcagatgcagcgtctccctgtcgttaactttgcagccggcggagttgca
acccctgccgacgcagccctcatgatgcgccttggcgccgacggtgtctttgtaggctca
ggaatcttcaaagccgaaaacccggaaaagatggcaaaagccgtagtcgaagccgtcaac
aactacgacgaccccgcaaagctcgccgaaatctccaagggcatcggcagtggcatgaaa
ggcatcagcgtcgacacgatccccagggaagaagcccttcaggaacgcggctggtaa
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