Metallosphaera sedula DSM 5348: Msed_0034
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Entry
Msed_0034 CDS
T00509
Name
(GenBank) DNA-directed RNA polymerase, subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
mse
Metallosphaera sedula DSM 5348
Pathway
mse03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mse00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Msed_0034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mse03021
]
Msed_0034
Enzymes [BR:
mse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Msed_0034
Transcription machinery [BR:
mse03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Msed_0034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
ABP94211
UniProt:
A4YCQ9
LinkDB
All DBs
Position
32163..34823
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AA seq
886 aa
AA seq
DB search
MSERYQVNEKIIKGVRFGILSPDEIRKMSVTAIITADVYDEDGTPIEGSVMDSRLGIIEP
GQKCPICGNVIGNCPGHFGHIELVRPVIHVGFVKHVYDLLRSTCRRCGRVKISENDIEKY
RKIYDAIKKRWPSAAKRLIDHVKKTSMKAAVCPHCSEKQLKIKLEKPYNFYEERKEGVMR
LTPSDIRERLERIPDSDVELLGYDPTTSRPEWIILTVLPVPPITIRPSIMIESGIRAEDD
LTHKLVDIVRINERLKESIDAGAPQLIVEDLWDLLQYHVATYFDNEIPGLPTSKHRSGRP
LRTLAQRLKGKEGRFRGNLSGKRVDFSARTVISPDPNISIDEVGVPYDVAQILTVPEKVT
KWNIERMRQYVINGPDKWPGANYVVRPDGRRIDLRYVKDRKELAATLAPNFIVERHLVDG
DIVIFNRQPSLHRISMMGHKVRVLPGRTFRLNLLVCPPYNADFDGDEMNLHVPQSEEAIA
ETKELMTVHRNILTPRYGGPIIGSAQDYISGAYLLTVKTTLLTEDEVQTILGVANINKNL
EEPAILAPKRLYTGKQIVSHFLPEDFNFHGPANISSGVRSCKDEDCPHDSYVVIKKGKLL
EGVFDKKALGNQQAESILHWLVREYDEDYVLWLMDNLFKVFLRYIELHGLTMTLSDVTIP
EEATKKIAERAQEARKKVNELIESYEKGQLEVIPGRTLEESLESYILDALDKLRNEAGEI
ATTYLDPFNNAYIMARTGARGSVLNITQMAAMLGQQSVRGERIKRGYATRTLPHFKPGDI
TPEARGFIYSSFRSGLNPIETFFHAAGGREGLVDTAVRTSQSGYMQRRLINALSDLRVEY
DGTVRTLYGEMIQTLYGGDGVHPMQSAHGKTIDVDRVLERVVGWKR
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagaggtatcaagttaacgagaagataataaagggagttagattcgggatactc
tcccccgatgaaataaggaagatgtcagttactgccataataaccgctgatgtgtatgac
gaagatgggacgcccatagaaggaagcgtaatggattcaagactcgggataatagagcct
ggtcagaagtgtccaatctgtggaaatgttataggcaactgtcctggacactttggacac
attgaattagtaaggcccgttatacatgttggattcgttaagcatgtctatgatctatta
agatccacatgtaggagatgtggtagggtaaagatcagcgagaatgatatagagaaatac
aggaagatttatgacgcgataaagaagaggtggccctcagcggctaaaagactcattgat
cacgtgaaaaaaacgtctatgaaggcagctgtatgtccgcattgctcagagaaacaactg
aaaatcaaactggagaagccctacaacttttacgaggagagaaaggagggtgtaatgagg
ctcactccctccgatatcagggaaagattagaaagaatacctgattctgatgtggagctt
ctaggttatgatccaaccactagcagacccgagtggataattcttaccgtactacctgta
cctcctattaccatcaggccctcaataatgatagagagcgggataagggcagaggacgat
ctaactcacaagctcgtggacatagttagaataaatgagagactaaaggagagcatagat
gcaggtgcccctcagttaattgtggaagatctttgggatctcctgcagtatcatgtggct
acctatttcgataatgagataccaggcctgcccacatctaagcatagatcgggtagaccg
cttagaactctggcacaaagactcaagggtaaagagggaagatttagaggtaacctttca
ggaaagagggttgatttttcagccagaaccgtaatatcgcctgatccaaatatcagtata
gatgaggttggagttccatacgacgtcgcacaaattctcactgtaccagagaaggtaact
aaatggaacatagagagaatgagacaatacgttataaacggtccagataagtggcccggt
gccaattatgtggttaggcctgatggaaggagaatagaccttagatatgttaaggacaga
aaggagctggctgcaaccctagctcctaactttatagtggaaaggcatttggttgacgga
gatatagtaattttcaacagacaaccatcgcttcatagaatatccatgatgggtcataag
gtgagagttctcccagggagaacctttaggcttaaccttttggtgtgtccaccgtataac
gctgattttgatggcgatgagatgaacctccatgttcctcagtcagaggaggcaatagcg
gagaccaaggaattgatgacagttcatcgcaatatattaacccctagatacggaggcccc
attataggttcagcccaggattatattagtggcgcatatctgctcaccgtcaaaacgact
ctactcacagaagatgaagttcagacgatactgggggtagctaacattaacaagaattta
gaggaaccagcgatcctggcccctaaaaggctctacacggggaagcagatagtcagtcac
ttccttcctgaagattttaacttccacggtcctgcaaacatatcgagcggtgtaaggtca
tgcaaggatgaggactgccctcatgactcttacgtggtgatcaagaaggggaaactcctg
gagggagtgtttgacaagaaagcgctaggaaaccagcaggctgagagtatactccactgg
ctcgtcagagaatatgatgaggattatgttctctggttaatggacaatctgtttaaggta
ttccttaggtacatcgagctccacggtctaaccatgacactctctgatgtaactattccg
gaggaagccacaaagaaaatcgcggaaagggcacaggaggcgaggaaaaaggttaacgag
ctcattgaaagttatgaaaaaggccaactcgaggtcatccctggtagaacgttagaagaa
agtttggaaagttacatccttgatgcgctagacaagctaagaaatgaagctggagagata
gccacgacttatctggatccatttaataatgcctatatcatggcaagaactggagcaagg
ggaagcgtactcaatatcactcaaatggcagccatgctaggtcaacaatcagtcagagga
gagagaataaaacgtgggtatgccactaggacgctccctcactttaagcctggggatata
acgccagaggctaggggattcatttactcgtccttcagaagcggattaaatccaatcgag
accttcttccacgctgcaggtggtagagagggtctagtggacaccgctgtgaggacgtct
cagagcggttacatgcagaggaggctcataaacgcgctctccgacctcagggttgagtac
gatggtacggttagaacgctgtatggagagatgatccagactctctacggtggagatgga
gtccatccaatgcaaagtgcacatggcaagaccatagatgtagatagagtcctagagaga
gtagttggttggaagaggtga
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