KEGG   Metallosphaera sedula DSM 5348: Msed_0083
Entry
Msed_0083         CDS       T00509                                 
Name
(GenBank) ERCC4 domain protein
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
mse  Metallosphaera sedula DSM 5348
Pathway
mse03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mse00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Msed_0083
   03460 Fanconi anemia pathway
    Msed_0083
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mse03032]
    Msed_0083
   03400 DNA repair and recombination proteins [BR:mse03400]
    Msed_0083
DNA replication proteins [BR:mse03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    Msed_0083
DNA repair and recombination proteins [BR:mse03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     Msed_0083
SSDB
Motif
Pfam: ERCC4 HHH_5 HHH_2 5_3_exonuc
Other DBs
NCBI-ProteinID: ABP94260
UniProt: A4YCV8
LinkDB
Position
72547..73239
AA seq 230 aa
MLRIYADTREKQSGIPDLLRDLGALVFLQQLSVGDYIVADGVAVERKNVFDLMNSVFDKR
FFDQLERLREVYSKVFILVEGNLEGAKTITTKWKIFNSALITATVDYDVGVLYSLDKRES
AEVLVTLARRYQERGVERKPISLHDKPKFESLDEMQLYLVQSLPNVGGKIALRLLTEFST
VRNICNSSIADLERVMKSRKKAELLYKIFNTKFSSNSDKKSASLTDFVEE
NT seq 693 nt   +upstreamnt  +downstreamnt
atgctgagaatttacgccgatactagggagaagcaatctggaattcctgaccttttacgc
gatctgggtgctttagtcttcttacagcagttatctgttggggactatatagtagctgac
ggggttgcagtggaaaggaaaaatgtttttgacttgatgaattctgtttttgacaagaga
tttttcgaccaactggaaaggctcagggaagtctactcaaaggtattcattcttgtggag
gggaatttggagggagccaagacaattacaactaagtggaagattttcaactctgccctc
attactgccactgtggattatgatgttggcgtcctttattctctagataagagggaatct
gcagaagtgttggttaccctggcaagaaggtaccaggagaggggtgtagagagaaagcct
atttcccttcatgacaaacctaagtttgaaagtttagatgagatgcagctctacctcgtt
caatctctgcccaacgtgggaggaaagatagccctaaggttgttaacagaattttccaca
gtaagaaatatatgtaattctagtatagcagaccttgagagagtaatgaagagcaggaaa
aaagcggaacttctgtataagatattcaatacgaagttctctagtaattcagataagaag
tctgcgtcgctgacagattttgtagaggaataa

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