KEGG   Metallosphaera sedula DSM 5348: Msed_0203
Entry
Msed_0203         CDS       T00509                                 
Name
(GenBank) LSU ribosomal protein L40E
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
mse  Metallosphaera sedula DSM 5348
Pathway
mse03010  Ribosome
Brite
KEGG Orthology (KO) [BR:mse00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    Msed_0203
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    Msed_0203
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:mse03011]
    Msed_0203
   04121 Ubiquitin system [BR:mse04121]
    Msed_0203
Ribosome [BR:mse03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    Msed_0203
  Archaea
    Msed_0203
Ubiquitin system [BR:mse04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   Msed_0203
SSDB
Motif
Pfam: Ribosomal_L40e zf-ChsH2 HypA Zn_ribbon_3 DZR HVO_2753_ZBP Zn_Ribbon_1 DnaJ_CXXCXGXG Zn_ribbon_HMPTM DUF7577 Zn_ribbon_tTFIIB Zn_ribbon_LapB Zn_ribbon_13 Zn_ribbon_8
Other DBs
NCBI-ProteinID: ABP94380
UniProt: A4YD78
LinkDB
Position
complement(167055..167225)
AA seq 56 aa
MPLTDQAKIQIVQERVFIKKVCRNCGALNSIRATKCRRCHSTNLRPKKKELPTKRA
NT seq 171 nt   +upstreamnt  +downstreamnt
atgcctttaacagatcaggcaaaaattcagatagtccaagagagagtgtttataaagaag
gtgtgcagaaactgcggtgcccttaactcgatcagggctacaaaatgcagaagatgtcat
agtacaaatctcagaccaaagaagaaggagttgccaactaagagagcttga

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