KEGG   Metallosphaera sedula DSM 5348: Msed_0212
Entry
Msed_0212         CDS       T00509                                 
Name
(GenBank) flap endonuclease 1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
mse  Metallosphaera sedula DSM 5348
Pathway
mse03030  DNA replication
mse03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mse00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Msed_0212
   03410 Base excision repair
    Msed_0212
   03450 Non-homologous end-joining
    Msed_0212
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mse03032]
    Msed_0212
   03400 DNA repair and recombination proteins [BR:mse03400]
    Msed_0212
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mse04147]
    Msed_0212
DNA replication proteins [BR:mse03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Msed_0212
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Msed_0212
DNA repair and recombination proteins [BR:mse03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Msed_0212
Exosome [BR:mse04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Msed_0212
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc HHH_5 HHH_2 SHU2
Other DBs
NCBI-ProteinID: ABP94389
UniProt: A4YD87
LinkDB
Position
173908..174810
AA seq 300 aa
MNRQGKVTSHLNGVFYRTVNLLEEGIIPIYVFDGKPPELKAQELENRRKMKEEAEKKLEK
AKESGKVEEMRKYSQMTSRLTTDMAKESKELLEYMGVPTVQAPSEGEAEAAYLNAKGITY
ASASQDYDSLLFGAEKLIRNLTISGKRKLPNKDVYVEVKPELIETASLLKKLEITREQLI
DIAILVGTDYNPDGVRGIGPKKAYKLIKTYKKIENIDKRELPEPIYFDYEKIRELFLKPQ
VTLPSTPLELSDPDPSKIIQFLVNENDFNEERVRGTIERLQKAMKEIKDIKRQTGLDQWF
NT seq 903 nt   +upstreamnt  +downstreamnt
atgaatagacaaggcaaggtaactagtcatctaaatggagtcttttatagaaccgtgaac
cttcttgaggaagggatcattccaatttacgttttcgatgggaagcctcctgagttgaag
gcccaggaactggagaacaggagaaaaatgaaggaggaggcagagaagaagctagagaag
gccaaggaatcgggaaaggtggaggaaatgaggaagtactcgcagatgacttccagactg
accaccgatatggcgaaggaaagcaaggaactcctggaatacatgggagtccccacagtt
caggccccatctgagggtgaagctgaggctgcctaccttaatgcgaagggaattacgtat
gcctccgccagtcaagactatgattctctgctcttcggcgcagagaagttgatcagaaac
ctcaccataagcgggaagaggaaactgcccaacaaggacgtgtacgtggaggtaaaacct
gaactcatcgagacagcttccctcctcaagaagctagagataacaagggagcaactgatt
gacattgcgattctggtgggaacggactacaaccccgatggagtaaggggcataggcccc
aagaaagcctataaactgatcaagacctacaaaaaaattgaaaatatagataaaagggag
ttacctgagcctatttactttgactacgaaaagataagggagttgttccttaaacctcaa
gtaactcttccgtccacaccacttgagctgagcgatcccgatcccagcaagataattcag
tttctggtgaacgagaacgattttaacgaggaaagggttaggggaacgatagagaggctt
cagaaggctatgaaggagattaaggatataaaaagacaaacagggttggatcagtggttt
taa

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