Metallosphaera sedula DSM 5348: Msed_0642
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Entry
Msed_0642 CDS
T00509
Name
(GenBank) translation elongation factor 1A GTP binding domain family
KO
K03231
elongation factor 1-alpha
Organism
mse
Metallosphaera sedula DSM 5348
Pathway
mse03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mse00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Msed_0642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mse03019
]
Msed_0642
03016 Transfer RNA biogenesis [BR:
mse03016
]
Msed_0642
03012 Translation factors [BR:
mse03012
]
Msed_0642
04131 Membrane trafficking [BR:
mse04131
]
Msed_0642
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mse04147
]
Msed_0642
Messenger RNA biogenesis [BR:
mse03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
Msed_0642
Transfer RNA biogenesis [BR:
mse03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
Msed_0642
Translation factors [BR:
mse03012
]
Eukaryotic type
Elongation factors
Msed_0642
Membrane trafficking [BR:
mse04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
Msed_0642
Exosome [BR:
mse04147
]
Exosomal proteins
Proteins found in most exosomes
Msed_0642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D2
GTP_EFTU_D3
GTP-eEF1A_C
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
ABP94817
UniProt:
A4YEG5
LinkDB
All DBs
Position
588046..589608
Genome browser
AA seq
520 aa
AA seq
DB search
MRFPRENDIGKIEYKLILSNLNEQRLQELATQMKYRLEEGGGEALYVVGVSDEGEAIGLS
MEELEATINTVERVASMISAKISHKRIVKVKDDLYVGELLVRIHKDKIPIQINVAVMGHV
NAGKSTLTGTLILGKLDDGNGSLRSAVARYLHEVISGRTSSITMRLLGFDSAGNPVNPQC
RDPTDEAEITLKSAKTIRLIDLGGHERYLRTTLKGLLGYEVDYVMLVVGADDGLSIMGRE
HLAVSTVLKFPIFVVITKVDKFPESRTAEIVNQVKEVLKIPGINRLAMEVEDEGDVLNGI
IGIRSKRVVPIFKVSNVTGQGLNLLIKFLNLLPPRRSTPSSDPLVYIDETYNVPGVGPVV
LGSVIRGKVSTNDSLLIGPSKYNEFKEVRIKSIQLNRVFVDSVNQGSIATFALQGIERDN
LRKGMVLVKAKPRAVRSFWARVILLHHPTTIKEGYVATLHLHTIRQAVRFVKIEKGILRT
GDSSDVQLAFMFRSEYVEPGQIFVFREGRTRGLGIITKID
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttccacgagagaacgatatcggaaagatagaatataaacttattctatcgaat
ctcaacgaacagaggctccaagaactagccacacaaatgaagtacagacttgaggaggga
ggaggcgaggccctatacgtggttggggttagtgacgagggagaagcaataggcctttcc
atggaggaactggaagctaccataaacactgtggaaagggtagcttccatgataagcgct
aaaatctctcacaagaggatagtgaaagtaaaggatgacctctacgttggagagcttctt
gtgaggatacataaggacaaaattcctattcagatcaacgtcgctgtgatgggacacgtt
aatgctgggaagagtacgctaactggaacattaatcctggggaaacttgatgacggcaat
ggatctctcaggagtgccgttgcgaggtacttgcacgaggtgatcagcggtagaacgtcg
tccataaccatgaggcttctaggctttgacagtgcaggtaaccctgtgaacccgcaatgc
agagatcctacagatgaggcagaaataaccctaaagagcgcgaagacgattagactgatt
gaccttgggggccacgagagatatcttaggaccacgctaaagggtctcctgggatatgag
gttgactacgtgatgcttgtggtgggtgcagacgatggattaagtatcatgggaagagaa
catctagctgtttccacggtgctcaagttcccaatcttcgtggtcatcaccaaggtggat
aagttcccggagtcgagaacggctgagatagtgaaccaagtgaaggaagtcctcaagata
ccgggaataaacaggctggccatggaagttgaagacgagggagatgtcctaaacggtatc
ataggcataagatcaaaaagggtcgttccaatctttaaggtctcaaatgtgacagggcaa
ggactaaatctcctgatcaaattcctcaatctacttccaccaagaaggtcaacgccatcc
tcagatcccctggtatatattgatgagacctataacgtgccaggagtcggacctgtggta
ctgggctcagttatccggggaaaggtctcaaccaacgatagcctactcattggtcccagt
aagtataacgagttcaaggaggttagaataaaaagcattcagttgaacagggttttcgta
gactcggtgaatcaaggatccatagcaacctttgcacttcaggggatagaaagggataac
ctaaggaaggggatggtgctagtaaaggccaaacctagggcggttagaagtttctgggcc
agagttatacttcttcatcacccaacaaccataaaggagggttacgtggccacgcttcac
cttcatacgatcaggcaggctgtaaggttcgtgaagatagagaaggggattctaaggacg
ggggacagctctgatgtacagctagctttcatgttcaggtcagagtacgtggagccggga
cagatattcgtatttagggagggtagaactaggggtttgggtattataactaagattgat
taa
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