KEGG   Metallosphaera sedula DSM 5348: Msed_1633
Entry
Msed_1633         CDS       T00509                                 
Name
(GenBank) LSU ribosomal protein L24A
  KO
K15172  transcription elongation factor SPT5
Organism
mse  Metallosphaera sedula DSM 5348
Brite
KEGG Orthology (KO) [BR:mse00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    Msed_1633
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mse03021]
    Msed_1633
   03019 Messenger RNA biogenesis [BR:mse03019]
    Msed_1633
Transcription machinery [BR:mse03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     Msed_1633
  RNA polymerase I system
     Msed_1633
Messenger RNA biogenesis [BR:mse03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     Msed_1633
SSDB
Motif
Pfam: Spt5-NGN KOW KOW4_SPT5 KOW2_Spt5 SH3_KIN17_C
Other DBs
NCBI-ProteinID: ABP95788
UniProt: A4YH86
LinkDB
Position
1574831..1575292
AA seq 153 aa
MEAPKVRNFYAVKVTGGQEISVAIMLEERIKTNGIGDVYSIIVPPGLKGYVIVESSGPHV
VKFIIAGIRHVRGVAPGLVPKDDIMKMVSKKQTGPSIKTGDMVEVVSGPFRGMQAQVMSY
NADRGEVVLNILESAFPLQVTIPVDQIRPVKKT
NT seq 462 nt   +upstreamnt  +downstreamnt
gtggaagcaccgaaagttaggaacttctatgccgtgaaggttacagggggtcaggaaata
agtgtcgcaattatgcttgaggagagaattaagacaaacggcattggagacgtttactcc
atcatagtcccgccaggactcaagggatatgttattgtggagagttctggtccacatgtg
gtgaagttcatcatcgctggtatcaggcatgtgagaggcgttgcccctgggcttgttccc
aaggatgacattatgaagatggtatcaaagaagcagacaggtccttccataaagacaggt
gacatggtggaggtcgtgtcaggcccattcaggggaatgcaggcccaggtcatgagttat
aatgcggatcgcggagaagtagttttaaatatactagaatcggcctttcctctacaggta
acaatacctgtagaccaaattagacccgttaaaaagacgtaa

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