Metallosphaera sedula DSM 5348: Msed_1785
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Entry
Msed_1785 CDS
T00509
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mse
Metallosphaera sedula DSM 5348
Brite
KEGG Orthology (KO) [BR:
mse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mse03016
]
Msed_1785
Enzymes [BR:
mse01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Msed_1785
Transfer RNA biogenesis [BR:
mse03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Msed_1785
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
ABP95940
UniProt:
A4YHN8
LinkDB
All DBs
Position
complement(1727165..1727707)
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AA seq
180 aa
AA seq
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MRLFIGIPVYDAPWLREALGMVERTGADVKLVEPQNVHITLAFLGEVAEDRVNLVRESLD
EVKFTAFRVVFRGLGAFPSVSRPRVVWMGITEGFNELKRIRTSLVKALNSRRVRVEEEQF
VPHLTLGRVKGPRGVLELAKLVEEMSDKQFGEQEVKEIVLFKSTLTPKGPIYDPLHRITA
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctattcatagggattccagtttatgacgcaccgtggctaagggaggctcttgga
atggtggagagaactggagctgacgtgaagctcgtggaaccccaaaacgttcacattacc
ctggctttcctgggggaagttgcggaggacagggtcaacctggtaagggagagcttggac
gaggtgaagttcacggccttcagggttgtgttcagggggttaggagctttccccagcgtg
tccagacctagggttgtgtggatgggaataactgaaggtttcaacgagctcaaaaggatc
aggacatccctggtgaaagccctaaactccaggagagttagggtggaagaggaacaattt
gttccgcaccttaccctgggaagggtaaagggaccgagaggtgtgctcgagcttgccaaa
ctcgtggaggagatgtcggacaagcagtttggtgaacaggaggtaaaggaaatagtcctg
ttcaagagcaccttaacccccaaggggcctatctacgatccacttcacagaatcacggca
taa
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