Metallosphaera sedula DSM 5348: Msed_2240
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Entry
Msed_2240 CDS
T00509
Name
(GenBank) DNA-directed RNA polymerase, subunit E''
KO
K15171
transcription elongation factor SPT4
Organism
mse
Metallosphaera sedula DSM 5348
Brite
KEGG Orthology (KO) [BR:
mse00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Msed_2240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mse03021
]
Msed_2240
03019 Messenger RNA biogenesis [BR:
mse03019
]
Msed_2240
Transcription machinery [BR:
mse03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
Msed_2240
RNA polymerase I system
Msed_2240
Messenger RNA biogenesis [BR:
mse03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
Msed_2240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Zn_ribbon_3
zf-C3HC4_3
Zn_ribbon_15
DZR
DUF7129
DUF6079
Motif
Other DBs
NCBI-ProteinID:
ABP96378
UniProt:
A4YIX6
LinkDB
All DBs
Position
complement(2145287..2145484)
Genome browser
AA seq
65 aa
AA seq
DB search
MSAKTLKACRSCKALVSKEVQQCPICNGTTFSDEWEGMVILLSEKSELAETIGESKPWRY
AINVK
NT seq
198 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccaagaccctcaaggcttgtaggtcgtgcaaggcattggttagcaaagaggtc
cagcaatgtcccatatgcaacggcacaacgtttagtgatgagtgggagggcatggttata
ctcctgagcgagaaatcggagcttgcagagacaataggtgagtctaaaccttggaggtac
gctataaacgtaaagtag
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