Metallosphaera sedula DSM 5348: Msed_2279
Help
Entry
Msed_2279 CDS
T00509
Name
(GenBank) Transcription factor IIE (TFIIE), alpha subunit
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
mse
Metallosphaera sedula DSM 5348
Pathway
mse03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mse00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Msed_2279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mse03021
]
Msed_2279
Transcription machinery [BR:
mse03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
Msed_2279
Prokaryotic type
Archaeal type
TFE
Msed_2279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
HTH_9
DUF7342
Zn_Ribbon_TF
Zn_ribbon_IS1595
HTH_20
DnaD_N
HTH_Crp_2
Phage_rep_org_N
HypA
TrmB
HTH_11
Rv2175c_wHTH
HTH_IclR
Zn_ribbon_FGT1_2
Zn_ribbon_TFIIB
GntR
HVO_2753_ZBP
HTH_PafC
HTH_Cmi2_C
zf-Mss51
Motif
Other DBs
NCBI-ProteinID:
ABP96417
UniProt:
A4YJ15
LinkDB
All DBs
Position
2178924..2179454
Genome browser
AA seq
176 aa
AA seq
DB search
MTGNIDQLMKDMARDLLGEDVIDVLSFLLDNKTELTDEEMANKLNVKVNEVRKKLYALAE
HGLVSYRRTRDKETGWYVYYWKANVDQINELLLSRKREILNKLKARLEYETNNEFYICPE
DKTKYTFEEAFENEFKCPKCGVQLVYYDSAKMREFLERKIKEIEEEIARETKVGSS
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcaacattgatcaactcatgaaagatatggctagggatctcctgggagaggac
gtaatagatgtgctctctttccttcttgataataagacagagctaactgacgaggagatg
gccaacaaactcaacgtcaaggttaacgaggtcaggaagaagttatatgcccttgctgaa
cacgggctggtgagctaccggagaaccagggataaggagactggttggtatgtatattac
tggaaggccaatgtggatcagataaatgaacttctcctctcacgtaagagggagatcctg
aacaaacttaaggctagattggagtacgaaactaacaacgagttctatatttgtcccgag
gataagaccaagtacacctttgaggaggcctttgagaatgagttcaaatgtcccaaatgc
ggtgttcaactggtctattacgattccgccaaaatgcgggaattcctagaacgtaaaata
aaggaaatagaagaggagatcgccagggagacaaaggttgggagctcctaa
DBGET
integrated database retrieval system
