Mesoterricola sediminis: METESE_00640
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Entry
METESE_00640 CDS
T09356
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
msea
Mesoterricola sediminis
Pathway
msea00541
Biosynthesis of various nucleotide sugars
msea01100
Metabolic pathways
msea01250
Biosynthesis of nucleotide sugars
Module
msea_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
msea00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
METESE_00640 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
msea01005
]
METESE_00640 (kdsA)
Enzymes [BR:
msea01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
METESE_00640 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
msea01005
]
Lipid A
METESE_00640 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
BDU75106
UniProt:
A0AA48H091
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All DBs
Position
74819..75652
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AA seq
277 aa
AA seq
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MDFSTPHTERSFFLIAGPCVIEGRDHAHFLASSLRDLAEARGIPFLFKASFDKANRTSKD
SYRGTSLEEGLDILSEIRTRHGVPVLTDVHESAQCPLVASAVDVLQIPAFLCRQTDLLLA
AGATGRAVNIKKGQFLAPWDLRHAVDKVRTVDGHGPVWVTERGASFGYGNLVVDFQGFPH
LRRTGCPVVFDATHSVQKPGALGHATGGAREMIPTLARAAATAVDGFFFEVHEDPSKALS
DGPNAIRLDAFGDLLDQLLAIWRASRAATLADPAAHP
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggacttcagcacaccgcacaccgaacgcagcttcttcctcatcgcggggccctgcgtc
atcgagggccgggaccacgcccacttcctggcgtccagcctgcgggacctggcggaggcc
cgggggatccccttcctgttcaaggccagcttcgacaaggccaaccgcacctccaaggac
agctaccgggggacctccctggaggagggcctcgacatcctctccgagatccgcacccgc
cacggcgtcccggtgctcaccgacgtgcacgagtccgcccagtgccccctggtggcctcg
gcggtggacgtgctccagattcccgccttcctgtgccggcagacggacctgctcctggcg
gcgggggccaccggccgggccgtgaacatcaagaagggccagttcctcgccccatgggac
ctccgccacgccgtggacaaggtccgcaccgtcgacgggcacggccccgtctgggtgacg
gagcggggggccagcttcggctacggcaacctcgtggtggacttccagggcttcccccac
ctgcgccgaaccggctgccccgtggtcttcgacgccacccacagcgtccagaagcccggc
gccctgggccacgccacgggcggcgcccgggagatgatcccaacgctcgctcgtgcggcc
gcgacggccgtggacgggttcttcttcgaggtgcacgaggacccctccaaggccctcagc
gacggccccaacgccatccgcctggacgccttcggcgacctcctggaccagctcctcgcc
atctggcgggcgagccgcgccgccaccctcgcggacccggcggcccacccctga
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