Mesoterricola sediminis: METESE_01090
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Entry
METESE_01090 CDS
T09356
Name
(GenBank) transcriptional regulator
KO
K03530
DNA-binding protein HU-beta
Organism
msea
Mesoterricola sediminis
Brite
KEGG Orthology (KO) [BR:
msea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msea03032
]
METESE_01090
03036 Chromosome and associated proteins [BR:
msea03036
]
METESE_01090
03400 DNA repair and recombination proteins [BR:
msea03400
]
METESE_01090
DNA replication proteins [BR:
msea03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
METESE_01090
Chromosome and associated proteins [BR:
msea03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
METESE_01090
DNA repair and recombination proteins [BR:
msea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
METESE_01090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
BDU75151
UniProt:
A0AA48H0C0
LinkDB
All DBs
Position
complement(131626..131925)
Genome browser
AA seq
99 aa
AA seq
DB search
MSKTTSKPETIGIPELSASLAEAHDLTKARAKAMLDNLRDEIVTSLLGGKRVNVFGLGTF
EVRATREKMGRNPKTGEKIQIPAGRKVVFKAAKGLKDQM
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaccacttccaagcccgaaaccatcggtatccccgaactctccgcctccctc
gccgaggcccacgatctcaccaaggcccgtgccaaggccatgctggacaacctccgggac
gagatcgtcacctccctcctgggcggcaagcgcgtgaacgtcttcggcctgggcaccttc
gaggtccgcgccacccgcgagaagatgggccgcaaccccaagaccggcgagaagatccag
atccccgccggccgcaaggtcgtcttcaaggccgccaagggcctcaaggaccagatgtag
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