Mesoterricola sediminis: METESE_10190
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Entry
METESE_10190 CDS
T09356
Name
(GenBank) LysR family transcriptional regulator
KO
K21645
LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
Organism
msea
Mesoterricola sediminis
Brite
KEGG Orthology (KO) [BR:
msea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msea03000
]
METESE_10190
Transcription factors [BR:
msea03000
]
Prokaryotic type
Helix-turn-helix
LysR family
METESE_10190
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
BDU76061
UniProt:
A0AA48GN01
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Position
1241654..1242553
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AA seq
299 aa
AA seq
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MEFTWLDDFLALAETGHFSRAAERRNLTQPAFSRRIQALEDWVGAPLFHRDARPVALTEA
GERFRPAAEEALGALARGRTEAREAGGAAAATLRFAATHALSLTFLPAWLHTLEAEVPLG
PVRLMADSMEACERILLAGQAHFLLCHHHDRAPSRLDPVECPFRALGTDVLIPVCAPGPG
GAPRFPAVPVGSTPAPHLAYGPESGMGRILAAAALPAALEPVFTSRVATVLVTAALDGRG
LAWLPLSLAREHLEARRLVRAGDTSWDVPMEIRIHRAPHVSPAAAAFWARIGGTAQPPA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggaattcacctggctcgacgatttcctcgccctggcggaaacgggccacttctcccgg
gccgccgagcgcaggaacctcacccagccggccttcagccgacggatccaggcgctggag
gactgggtgggcgcgcccctcttccatcgggatgcgcgccccgtggccctcacggaggcc
ggggagcgcttccggcccgccgcggaggaggcgctgggcgccctggcccgggggcggacc
gaggcccgggaggcggggggcgccgccgcggccaccctccgcttcgccgccacccacgcc
ctgagcctcaccttcctgccggcctggcttcacaccctcgaggccgaagtccccctgggg
ccggtgcgcctcatggccgacagcatggaggcctgcgagcggatcctcctggccggccag
gcccacttcctcctctgccaccaccacgatcgcgcgccctcccggctcgacccggttgaa
tgccccttccgggcgctggggaccgatgtcctgatcccggtctgcgccccggggcccggc
ggcgccccgcgcttcccggcggttccggtcgggtccacgcccgcaccccacctggcctac
ggccccgaatcgggcatggggcgcatcctggctgccgcggcgctgcccgcggccctggaa
cccgtgttcacctcccgggtcgccaccgtgctggtcacggcggccctggatggccgcggc
ctcgcctggctccccctctccctggcgcgggagcacctggaggccaggcgccttgttcgg
gcgggcgacacctcctgggacgtccccatggaaatccgcatccaccgggccccccacgtg
tcccccgccgcggcggccttctgggcccgtatcggggggacggcccagcctccggcttga
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