Mesoterricola sediminis: METESE_10300
Help
Entry
METESE_10300 CDS
T09356
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
msea
Mesoterricola sediminis
Pathway
msea00071
Fatty acid degradation
msea00280
Valine, leucine and isoleucine degradation
msea00310
Lysine degradation
msea00362
Benzoate degradation
msea00380
Tryptophan metabolism
msea00410
beta-Alanine metabolism
msea00640
Propanoate metabolism
msea00650
Butanoate metabolism
msea00907
Pinene, camphor and geraniol degradation
msea00930
Caprolactam degradation
msea01100
Metabolic pathways
msea01110
Biosynthesis of secondary metabolites
msea01120
Microbial metabolism in diverse environments
msea01200
Carbon metabolism
msea01212
Fatty acid metabolism
Module
msea_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
msea00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
METESE_10300 (fadB)
00650 Butanoate metabolism
METESE_10300 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
METESE_10300 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
METESE_10300 (fadB)
00310 Lysine degradation
METESE_10300 (fadB)
00380 Tryptophan metabolism
METESE_10300 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
METESE_10300 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
METESE_10300 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
METESE_10300 (fadB)
00930 Caprolactam degradation
METESE_10300 (fadB)
Enzymes [BR:
msea01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
METESE_10300 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
METESE_10300 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
METESE_10300 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
METESE_10300 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
BDU76072
UniProt:
A0AA48KD91
LinkDB
All DBs
Position
complement(1256107..1258263)
Genome browser
AA seq
718 aa
AA seq
DB search
MTFEGQSIQCAMLEGGIAELRFDLQGEPINKFNRATLDELREAVAAIKADPAVRGLLVTS
GKDCFIVGADVTEFLTYFRNTEDQLAAWLLEVDALFNTVEDFPFPSVAAINGFALGGGLE
FALAATYRVMASGTRIGVPETKLGIFPGWGGTVRLSRLTGADNAIEWIAGGEQHGPEAAF
KVGAVDAVVEPARVREAALHLLREAMEGRRDWKARVEEKKAPLQLNPTEAMMAFEGAKAF
VAGKAGPNYPSPVAAIEAMQKGATRRRDDALPIEAAAFARMAKTATARNLVSIFLGDAAV
NRIAKKLAREGVHVRASAVLGAGIMGGGIAYQSASRGVRIVMKDIAEPALELGLSEAAKL
LGKRIERGKLTPADMAATLGRIRPTLGYGDFGEVDLVVEAVVEKEEVKKAVLADVEGRVR
PGTVLASNTSTISITRLAEGLQRPGDFCGMHFFNPVHKMPLVEVIRGALTSDAAVATTVG
YALALGKTPVVVNDCPGFLVNRILFPYFAAFNLLVGEGVDFLRIDRLLEKFGWPMGPAYL
LDVVGIDTARHAAAVMAKGFPDRMDDSGPSALKAMFEAGRFGQKNGKGFYRYVPDRKGTP
KKEPDPEVAGLLRPVQAAAPAELSDADIVDRMMLPLIIESARCLEDGIVGTPTELDIALV
YGLGFPPFRGGALRHADAVGLKALCERAEAFLSLGRLYEPTARMRELAQAGGTFHQEK
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgacattcgaaggccaatccatccagtgcgccatgctcgagggcggcattgcagagctg
cggttcgacctccagggcgagccgatcaacaagttcaaccgcgccaccctcgacgagctg
agggaggccgtggccgccatcaaggccgaccccgccgtgcgcggcctcctcgtcaccagc
ggcaaggactgcttcatcgtcggcgccgacgtcactgaattcctcacctacttccgcaac
accgaggaccagctcgcggcctggctcctggaggtggacgccctgttcaacacggtggag
gacttccccttcccgtccgtcgccgccatcaacggcttcgccctcggcggcggcctggag
ttcgccctcgccgccacctaccgggtgatggcctccggcacgcggatcggcgtgcccgag
acgaagctcggcatcttccccggctggggcgggacggtccgcctctcccgcctgaccggc
gccgacaacgccatcgaatggatcgccggcggcgagcagcacgggcccgaggcggccttc
aaggtgggcgccgtggacgcggtggtggagcccgcccgcgtccgggaggccgccctccac
ctcctgcgcgaggccatggagggccgccgggactggaaggcccgggtggaggagaagaag
gcccccctgcagctcaatcccaccgaggccatgatggccttcgagggcgccaaggccttc
gtcgccggcaaggccggccccaactacccctcgcccgtggccgccatcgaggccatgcag
aagggggccacccgcaggcgcgacgacgccctgcccatcgaggccgcggccttcgcccgc
atggccaagaccgccacggcccgcaacctcgtctccatcttcctgggcgacgccgccgtg
aaccgcatcgccaagaagctcgcccgcgagggcgtccacgtgcgcgcctcggccgtgctg
ggcgccggcatcatggggggcggcatcgcgtaccagtccgccagccgaggggtgcgcatc
gtcatgaaggacatcgcggaacccgccctggagctgggcctctccgaggccgccaagctt
ctcgggaagcgcatcgagcgcggcaagctgacgcccgccgacatggccgcgaccctcggg
cgcatccggccgacgctgggctacggcgacttcggggaggtggacctggtcgtggaggcc
gtggtcgagaaggaggaggtgaagaaggccgtcctcgcggacgtggagggccgggtccgg
ccgggcacggtgctcgccagcaacacctccaccatctccatcacccgcctcgcggagggc
ctccagcggcccggcgacttctgcggcatgcacttcttcaaccccgtccacaagatgccc
ctcgtggaggtgatccgcggcgcgctcacctcggacgccgccgtggccaccaccgtgggc
tacgccctggccctgggcaagaccccggtggtcgtcaacgactgccccggcttcctggtg
aaccggatcctcttcccctacttcgccgccttcaacctgctcgtcggcgagggggtggat
ttcctccgcatcgaccggctcctggagaagttcggctggcccatgggcccggcctacctc
ctggacgtggttggcatcgacacggcgcgccacgccgcggccgtgatggcgaagggcttc
ccggaccgcatggacgattcgggcccctccgccctcaaggccatgttcgaggccggccgg
ttcggccagaagaacgggaagggcttctatcggtacgtgcccgaccgcaaggggaccccc
aagaaggaaccggacccggaggtggccggcctgctgcggccggtccaggccgcggccccg
gccgagctttccgacgcggacatcgtggaccgcatgatgctccccctgatcatcgagagc
gcccggtgcctggaggacggcatcgtcggcacccccaccgagctcgacatcgccctcgtc
tacggcctgggcttcccccccttccggggcggggccctgcgccacgccgacgccgtcggc
ctgaaggccctctgcgagcgggccgaggccttcctgtccctgggccggctctacgagccc
acggcccgcatgcgcgaactcgcccaggcgggcggcaccttccaccaggagaagtga
DBGET
integrated database retrieval system
